New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3255679 = | 46 (0.880) | 7 (0.140) | 5/254 | NT | 13.6% | coding (59/2202 nt) | PP_2852 | sulfatase domain‑containing protein |
? | NC_002947 | 3255714 = | 45 (0.910) | coding (24/2202 nt) | PP_2852 | sulfatase domain‑containing protein |
CCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCC > NC_002947/3255567‑3255857 | aagccttgtaactggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCtt > 6:242317‑M1/113‑148 (MQ=255) aagccttgtaactggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCtt < 5:242317‑M1/36‑1 (MQ=255) gacGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTgg < 4:218723/148‑1 (MQ=255) cacGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTgg > 4:315954/1‑149 (MQ=255) cacGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTgg < 2:326925/149‑1 (MQ=255) cTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTc > 3:160257/1‑149 (MQ=255) taacttgactcattccctgccctgtcctgatatcatcaagcacagatgcatgacgatttaatgtaaaaagggaattttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTc > 3:219354‑M1/105‑148 (MQ=255) taactggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTc > 3:215138‑M1/105‑148 (MQ=255) tGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCg > 2:159150/1‑149 (MQ=255) ggTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGAc < 1:214223/149‑1 (MQ=255) ctggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGAc > 3:205221‑M1/102‑149 (MQ=255) aaCAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACaaaaa < 2:211618/148‑1 (MQ=255) ggCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTcc < 6:134059/149‑1 (MQ=255) ggCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCAt < 3:35036/149‑1 (MQ=255) gagaTCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTa > 6:134553/1‑148 (MQ=255) gagaTCGGACAGGTAAACGAACGTGTTTGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCAAAAGTTGCAAGCCGTGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTaa < 6:276536/149‑1 (MQ=255) aGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACaaaa > 6:40570/1‑120 (MQ=255) aGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACaaaa < 5:40570/120‑1 (MQ=255) gTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCAt < 3:89817/149‑1 (MQ=255) aaCGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCt > 4:158865/1‑149 (MQ=255) ggTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTtgat < 4:160257/149‑1 (MQ=255) ttGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTtgatga > 6:177532/1‑149 (MQ=255) gACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGatat > 3:269852/1‑149 (MQ=255) gACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGatat > 5:123522/1‑149 (MQ=255) ccAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGatat > 5:94521/1‑147 (MQ=255) cAACCCAGCATGGCGCGCGTACCCAGTGGGATCACTAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAg < 4:71486/149‑1 (MQ=255) cAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAg < 1:159150/149‑1 (MQ=255) ccAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTc < 1:187702/120‑1 (MQ=255) ccAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTc > 2:187702/1‑120 (MQ=255) aGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTaa < 5:19508/112‑1 (MQ=255) aGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTaa > 6:19508/1‑112 (MQ=255) cATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCcaggg > 8:187723/1‑148 (MQ=255) tACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAggcgg < 3:315954/149‑1 (MQ=255) tACCCAGGGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAggcgg < 8:205233/149‑1 (MQ=255) aCCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAggcggc > 8:137371/1‑149 (MQ=255) ccAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAggcggc > 7:236296/1‑147 (MQ=255) ccAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAggcggc > 2:93237/1‑147 (MQ=255) ccAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAggcggc > 2:219786/1‑147 (MQ=255) gtccgaccacccaagcacccggcttgccactttggcggctctggtgctTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAg > 3:205221‑M2/49‑149 (MQ=255) gaccacccaagcacccggcttgccactttggcggctctggtgctTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTa > 3:215138‑M2/45‑148 (MQ=255) gaccacccaagcacccggcttgccactttggcggctctggtgctTGGGTGGTCGGACAGGTTCTTCACAAAAAATTCCCTTTTTACATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGACAGGGCAGGGAATGAGTCAAGTTa > 3:219354‑M2/45‑148 (MQ=255) gATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACaa < 8:236296/149‑1 (MQ=255) gATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACaa < 6:123522/149‑1 (MQ=255) aTCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAg < 1:219786/149‑1 (MQ=255) aTCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAg < 5:177532/149‑1 (MQ=255) aTCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAg > 6:8068/1‑149 (MQ=255) ccagcaccagAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGCCAGGGAAGGCGGCCAGTTACAAGGCtt > 2:152076/1‑149 (MQ=255) aagcacccggcttgccactttggcggctctggtgctTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCtt > 6:242317‑M2/37‑148 (MQ=255) aagcacccggcttgccactttggcggctctggtgctTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCtt < 5:242317‑M2/112‑1 (MQ=255) CCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAAc < 4:246858‑M1/148‑1 (MQ=255) ccggcttgccactttggctgctctggtgctTGGGTTTTCTTACAGGTTATTCAAAAAAAATTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATTATATCATTCCATGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCa < 4:219354‑M2/119‑1 (MQ=255) ccggcttgccactttggcggctctggtgctTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCa < 4:215138‑M2/119‑1 (MQ=255) agCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAg > 2:314658/1‑149 (MQ=255) cgccAAATTGGCAAAGCGGGTGCTTGGGTGGGCGGAAATGTTCTTAAAAAAAAATTCCCTTTTTCCATTAAATCGTCATTCATCTGTGGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGc < 1:93237/148‑1 (MQ=255) ccAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGatat > 7:294046/1‑97 (MQ=255) ccAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGatat < 8:294046/97‑1 (MQ=255) ccAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCggg < 3:158865/149‑1 (MQ=255) tGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGtt > 4:157503/1‑149 (MQ=255) gCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCg < 7:187723/149‑1 (MQ=255) gCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCg < 1:314658/149‑1 (MQ=255) aaGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGca > 6:160543/1‑149 (MQ=255) gtgctTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCTGTGCGAACGGGccc < 5:8068‑M2/144‑1 (MQ=255) | CCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGT‑GCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCC > NC_002947/3255567‑3255857 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |