New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3949811	56 (1.080)	3 (0.060)	3/252	NT	5.3%	coding (1226/1491 nt)	PP_3486	cytochrome c
	?	NC_002947	= 3949852	55 (1.120)					coding (1185/1491 nt)	PP_3486	cytochrome c

CAGTGCCGGGGTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCGGCTACCTGACTG  >  NC_002947/3949663‑3949957                                                                                                                                                      |                                                                                                                                                   cAGTGCCGGGGTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGC                                                                                                                                                    >  2:173951‑M1/1‑149 (MQ=255)   gTGCCGGGGTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGgcgc                                                                                                                                                  <  1:173951/149‑1 (MQ=255)   gTGCCGGGGTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGgcgc                                                                                                                                                  <  6:6076/149‑1 (MQ=255)      ccGGGGTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCATCGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCgg                                                                                                                                                <  3:302215/148‑1 (MQ=255)       cGGGGTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAGCCAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGa                                                                                                                                               <  1:76208/149‑1 (MQ=255)       cGGGGTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGAt                                                                                                                                              >  2:287139/1‑149 (MQ=255)         gggTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATcc                                                                                                                                            <  3:55822/149‑1 (MQ=255)         gggTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATcc                                                                                                                                            <  6:302569/149‑1 (MQ=255)                      gggCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTgg                                                                                                                                   >  2:87926/1‑145 (MQ=255)                      gggCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTgg                                                                                                                                   <  1:87926/145‑1 (MQ=255)                          acaTCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGctgctg                                                                                                                           <  4:170541/149‑1 (MQ=255)                          acaTCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGctgctg                                                                                                                           <  6:131616/149‑1 (MQ=255)                           caTCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCtgctgc                                                                                                                          <  5:105038/149‑1 (MQ=255)                            aTCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCa                                                                                                                         >  2:272031/1‑149 (MQ=255)                                  cAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCg                                                                                                                    <  4:144288/148‑1 (MQ=255)                                   aGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGc                                                                                                                  <  7:114552/149‑1 (MQ=255)                                     gCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGc                                                                                                                  >  5:234144/1‑147 (MQ=255)                                     gCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGa                                                                                                                <  1:79774/149‑1 (MQ=255)                                          cGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAgcg                                                                                                             >  7:287158/1‑147 (MQ=255)                                           gAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCa                                                                                                           <  8:187931/148‑1 (MQ=255)                                               gcagcaATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAgccag                                                                                                      >  7:229109‑M2/1‑144 (MQ=255)                                                cagcaATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAgccagg                                                                                                     >  6:244050‑M2/1‑143 (MQ=255)                                                     aTCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGTGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTg                                                                                                <  1:43211/149‑1 (MQ=255)                                                     aTCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTg                                                                                                >  4:51716/1‑149 (MQ=255)                                                        aGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCtgcgctcgccgggctgcagcagcgccagggcctggatccgcgccaggcgtcatt                                                                                              <  8:82629‑M1/148‑55 (MQ=255)                                                        aGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTc                                                                                             >  4:252802/1‑149 (MQ=255)                                                         gTTGCTAGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGAAACGCGCATAGCGTATAGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCg                                                                                            >  5:230234/1‑149 (MQ=255)                                                            gCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGt                                                                                          <  2:224268/148‑1 (MQ=255)                                                                 cgGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTc                                                                                    <  3:51716/149‑1 (MQ=255)                                                                  ggCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTcc                                                                                   >  8:182036/1‑149 (MQ=255)                                                                       gCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGTATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCa                                                                                <  7:145204/147‑1 (MQ=255)                                                                       gCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCa                                                                                <  2:44072/147‑1 (MQ=255)                                                                          tCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCAc                                                                           <  1:272031/149‑1 (MQ=255)                                                                                ccAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAggg                                                                     <  8:287158/149‑1 (MQ=255)                                                                                 cAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCa                                                                                <  1:139489/137‑1 (MQ=255)                                                                                 cAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCa                                                                                >  2:139489/1‑137 (MQ=255)                                                                                 cAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAgggg                                                                    <  2:27062/149‑1 (MQ=255)                                                                                 cAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAggg                                                                     <  6:230234/148‑1 (MQ=255)                                                                                  aaTCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAgggg                                                                    >  4:164770/1‑148 (MQ=255)                                                                                  aaTCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAgggg                                                                    >  8:303249/1‑148 (MQ=255)                                                                                   aTCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCtgcgctcgccgggctgcagcagcgccagggcctggatccgcgccaggcgtcattgc                                                                                            <  8:108251‑M1/123‑57 (MQ=255)                                                                                   aTCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCtgcgctcgccgggctgcagcagcgccagggcctggatccgcgccaggcgtcattgc                                                                                            >  7:108251‑M1/1‑67 (MQ=255)                                                                                    tCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAg                                                                 >  3:124545/1‑149 (MQ=255)                                                                                      tGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGc                                                               >  3:203382/1‑149 (MQ=255)                                                                                       gCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACg                                                                          <  4:34603/137‑1 (MQ=255)                                                                                       gCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACg                                                                          >  3:34603/1‑137 (MQ=255)                                                                                       gCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGc                                                               >  1:140895/1‑148 (MQ=255)                                                                                        cTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCGAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAgg                                                                <  4:118225/146‑1 (MQ=255)                                                                                            aGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGaaa                                                         <  1:287139/149‑1 (MQ=255)                                                                                            aGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGaaa                                                         <  4:171998/149‑1 (MQ=255)                                                                                                    gCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCt                                                 >  5:283147/1‑149 (MQ=255)                                                                                                     cTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTg                                                >  4:88227/1‑149 (MQ=255)                                                                                                        ag‑cagGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGa                                             <  3:252802/149‑1 (MQ=255)                                                                                                                             cGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAgcgcg                         >  1:326701/1‑149 (MQ=255)                                                                                                                                    aCCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAgc                  <  6:234144/149‑1 (MQ=255)                                                                                                                                    aCCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAgc                  >  8:51383/1‑149 (MQ=255)                                                                                                                                    aCCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAgc                  >  8:158836/1‑149 (MQ=255)                                                                                                                                       tGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGcc               >  6:163766/1‑149 (MQ=255)                                                                                                                                        gCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAgccaggcgtcattgcaggtcaatacgctatgcgcgttgcgcctgctgagcgaagcgctgaagcagat                                        >  7:108251‑M2/1‑56 (MQ=255)                                                                                                                                        gCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAgccaggcgtcattgcaggtcaatacgctatgcgcgttgcgcctgctgagcgaagcgctgaagcagat                                        <  8:108251‑M2/123‑68 (MQ=255)                                                                                                                                        gCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCg              >  8:132990/1‑149 (MQ=255)                                                                                                                                        gCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCg              >  4:169785/1‑149 (MQ=255)                                                                                                                                         cAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGcc               <  7:303249/147‑1 (MQ=255)                                                                                                                                         cAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCgg             <  7:182036/149‑1 (MQ=255)                                                                                                                                          aaTGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAgccaggcgtcattgcaggtcaatacgctatgcgcgttgcgcctgctgagcgaagcgctgaagcagattggacgggatgccagccgcgagcaact             <  8:82629‑M2/148‑95 (MQ=255)                                                                                                                                          aaTGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAg                             <  6:271500/132‑1 (MQ=255)                                                                                                                                          aaTGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAg                             >  5:271500/1‑132 (MQ=255)                                                                                                                                          aaTGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCGGc            <  7:158836/149‑1 (MQ=255)                                                                                                                                               cGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCGGCTACCt       <  4:124545/149‑1 (MQ=255)                                                                                                                                                 ccTGGCtgcgctcgccgggctgcagcagcgccagggcctggatccgcgccaggcgtcattgcaggtcaatacgctatgcgcgttgcgcctgctgagcgaagcgctgaagcagattggacgggatgccagccgcgagcaactgattgctg     >  6:244050‑M1/1‑6 (MQ=255)                                                                                                                                                  cTGGCtgcgctcgccgggctgcagcagcgccagggcctggatccgcgccaggcgtcattgcaggtcaatacgctatgcgcgttgcgcctgctgagcgaagcgctgaagcagattggacgggatgccagccgcgagcaactgattgctgc    >  7:229109‑M1/1‑5 (MQ=255)                                                                                                                                                  cTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCGGCTACCTGAc    >  5:299718/1‑149 (MQ=255)                                                                                                                                                  cTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCGGCTACCTGAc    >  6:139425/1‑149 (MQ=255)                                                                                                                                                   tGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCGGCTACCTGACt   >  1:304505/1‑149 (MQ=255)                                                                                                                                                     gcgcGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCGGCTACCTGACTg  >  6:232692/1‑148 (MQ=255)                                                                                                                                                      |                                                                                                                                                   CAGTGCCGGGGTCAGGCCGGTGGGCACATCGTGCAGGCCTTCGAGCGCAGCAATCAGTTGCTCGCGGCTGGCATCCCGTCCAATCTGCTTCAGCGCTTCGCTCAG‑CAGGCGCAACGCGCATAGCGTATTGACCTGCAATGACGCCTGGCGCGGATCCAGGCCCTGGCGCTGCTGCAGCCCGGCGAGCGCAGCCAGGCCTTGCTCGGTCCAGTCCTCAGGCACGTAGGGGTAGGCCAGAAACAGCCGCTGCGACCACTGCGCCGGCAAGCGCGCCACAGCGCCGGCTACCTGACTG  >  NC_002947/3949663‑3949957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.