New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4079414 =51 (0.980)4 (0.090) 4/218 NT 9.3% intergenic (‑218/+166) sdaC/amaC serine:H+ symport permease/D‑lysine aminotransferase
?NC_002947 4079531 = 36 (0.850)intergenic (‑335/+49) sdaC/amaC serine:H+ symport permease/D‑lysine aminotransferase

CCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGG  >  NC_002947/4079268‑4079556
                                                                                                                                                  |                                                                                                                                              
cgtgtacctgatcgacagcggccgtgtgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggactttgt                                                                                                                                              >  1:22907‑M1/147‑149 (MQ=255)
 gtgtacctgatcgacagcgggggtgtgtgcatgtccggcctgcgcccggccaacctgcaacgtgttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgggggccctcctgtggggcgcggttggactttgtg                                                                                                                                             >  8:88914‑M1/146‑149 (MQ=255)
  ggAAATGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTgg                                                                                                                                            >  8:42995/1‑149 (MQ=255)
  ggAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGTATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTgg                                                                                                                                            <  3:38367/149‑1 (MQ=255)
  ggAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTgg                                                                                                                                            <  8:221101/149‑1 (MQ=255)
      cctgatcgacagcggccgtgtgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGc                                                                                                                                        <  3:306972‑M1/9‑1 (MQ=255)
      aaGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGCAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGc                                                                                                                                        >  1:46083/1‑149 (MQ=255)
       ctgatcgacagcggccgtgtgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCg                                                                                                                                       >  3:258746‑M1/140‑149 (MQ=255)
         agGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGc                                                                                                                                     <  5:150653/149‑1 (MQ=255)
            cgacagcggccgtatgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCggccgt                                                                                                                                  <  5:39732‑M1/15‑3 (MQ=255)
             gacagcggccgtgtgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTg                                                                                                                                 <  2:295984‑M1/16‑1 (MQ=255)
              cgcgATTGGGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGc                                                                                                                                <  3:115930/149‑1 (MQ=255)
               gcgATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCg                                                                                                                               >  2:209497/1‑149 (MQ=255)
                   ttGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTcgc                                                                                                                           <  7:250529/149‑1 (MQ=255)
                   ggccgtgtgtgcatgtccggccttcgcccggccaagctgcatcgggttgcggaagcgttctctgcggttctgaagttactctccaacgggccaactgcggcgcctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTcgc                                                                                                                           >  8:116452‑M1/128‑149 (MQ=255)
                   ggccgtgtgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGc                                                                                                                                <  8:166910‑M1/17‑1 (MQ=255)
                   ggccgtgtgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGc                                                                                                                                >  7:166910‑M1/128‑144 (MQ=255)
                      tgCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAt                                                                                                                        <  3:232339/149‑1 (MQ=255)
                         aCGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAgg                                                                                                                     <  2:97276/149‑1 (MQ=255)
                              aaGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTTGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGc                                                                                                                <  4:100238/149‑1 (MQ=255)
                                     cACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTCCAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCgg                                                                                                         <  7:255743/149‑1 (MQ=255)
                                      aCTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc                                                                                                        <  5:137259/149‑1 (MQ=255)
                                      aCTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTACCGATAGGGCCGCAAACCGGc                                                                                                        >  3:128641/1‑149 (MQ=255)
                                          gCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGccc                                                                                                      >  7:193459/1‑147 (MQ=255)
                                           cGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCAg                                                                                                   >  6:273201/1‑149 (MQ=255)
                                           cGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCa                                                                                                    <  8:193459/148‑1 (MQ=255)
                                            gAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGccctatc                                                                                                  <  8:82326/149‑5 (MQ=255)
                                               gCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAt                                                                                               <  6:159011/149‑1 (MQ=255)
                                                  cTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAttt                                                                                             >  7:41382/1‑148 (MQ=255)
                                                        cGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTAAGCgg                                                                                       >  5:61515/1‑148 (MQ=255)
                                                         gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAtt                                                                                              <  1:121864/140‑1 (MQ=255)
                                                         gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAtt                                                                                              >  2:121864/1‑140 (MQ=255)
                                                            gagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGCAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAg                                                                                  <  2:46083/149‑1 (MQ=255)
                                                              gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCGCAATTTCAGCGGCAAAGCt                                                                                >  4:142156/1‑149 (MQ=255)
                                                              gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCgg                                                                                       <  3:316205/142‑1 (MQ=255)
                                                              gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCgg                                                                                       >  4:316205/1‑142 (MQ=255)
                                                              gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCt                                                                                >  4:137117/1‑149 (MQ=255)
                                                                  ttGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTGGGGATAGGGCCGCCAAGCGGCCCCAGCAATTTCAGCGGCAAAgggggct                                                                            >  4:38464/1‑143 (MQ=39)
                                                                     cgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCg                                                                         <  6:48440‑M1/72‑1 (MQ=255)
                                                                           tCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgggg                                                                   >  5:121964/1‑149 (MQ=255)
                                                                           tCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAggg                                                                    <  1:110462/148‑1 (MQ=255)
                                                                                       gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCAccc                                                       <  3:142156/149‑1 (MQ=255)
                                                                                       gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCAccc                                                       <  3:137117/149‑1 (MQ=255)
                                                                                        aaGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGAGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTAAGCGGCAAAGCTGCAATAGTAGGGGCGCTCCGCACCCt                                                      >  2:139946/1‑149 (MQ=255)
                                                                                         agaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCtt                                                     <  4:138687‑M1/92‑1 (MQ=255)
                                                                                           aagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGc                                                                                                                                >  4:199179‑M1/56‑72 (MQ=255)
                                                                                           aagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGc                                                                                                                                <  3:199179‑M1/17‑1 (MQ=255)
                                                                                            cATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTc                                                  <  6:121964/149‑1 (MQ=255)
                                                                                            cATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTc                                                  >  6:30911/1‑149 (MQ=255)
                                                                                             aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTGGCGCTAGGGCCGCAAAGCGGGCCCAGCAAATTAAGCGGCCAAGCTGCAATCGTAGGGGCGCTCCGCCCCCgtttag                                                 >  3:121682/1‑147 (MQ=255)
                                                                                              ttGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTcgc                                                <  5:30911/149‑1 (MQ=255)
                                                                                                 cTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGa                                              <  6:197363/148‑1 (MQ=255)
                                                                                                    gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCGCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg                                                                     >  7:276806/1‑122 (MQ=255)
                                                                                                    gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg                                                                     <  8:276806/122‑1 (MQ=255)
                                                                                                    gccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGc                                           >  5:48440‑M1/47‑148 (MQ=255)
                                                                                                     tgtgGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCaa                                         <  2:123325/149‑1 (MQ=255)
                                                                                                     ccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCaa                                         >  3:138687‑M1/46‑149 (MQ=255)
                                                                                                         gATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc                                                                                         >  1:214385/1‑97 (MQ=255)
                                                                                                         gATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc                                                                                         <  2:214385/97‑1 (MQ=255)
                                                                                                          aTCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCg                                    <  1:209497/149‑1 (MQ=255)
                                                                                                               tGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCaa                                         <  1:95204/139‑1 (MQ=255)
                                                                                                               tGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCaa                                         >  2:95204/1‑139 (MQ=255)
                                                                                                                 gAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGCCAAAGCTGCAATCGTAGGGCCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCcac                             <  1:52510/149‑1 (MQ=255)
                                                                                                                   aTGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAg                                        <  2:220449/136‑1 (MQ=255)
                                                                                                                   aTGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAg                                        >  1:220449/1‑136 (MQ=255)
                                                                                                                        gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTc                       >  1:88572/1‑148 (MQ=255)
                                                                                                                               gggCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGTCGCGATAGGGCCGCCAAGCGGCCCCAGCAAATTAAGCCGCAAAGCTGCAATAGTAGGGGCGCTCCGCCCCCATTTAGCCACGCAAGGCCCCTCCCCCAAACTCCaaacccc               >  2:83433/1‑144 (MQ=25)
                                                                                                                                       gtgGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTGCGCCCCCTTTTCGCGACGCAAGGGCGCGCCCACAAAGTCCAACCGCGCCCCCCag       >  1:91970/1‑149 (MQ=25)
                                                                                                                                            gcggcCTGTGGGAGCGGCCATGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTAAGCGGCAAAGCTGCAATAGTAGGGGCGCTCCGCACCCGTTTAGCGCCCCAAGGCCCCTCCCACAAAGTACAACCCCGCCCCACACGAggg  >  2:73801/1‑149 (MQ=25)
                                                                                                                                                  |                                                                                                                                              
CCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGG  >  NC_002947/4079268‑4079556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.