New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4963231 =	75 (1.440)	4 (0.080)	3/254	NT	6.1%	coding (424/1218 nt)	fleS	two‑component system sensor histidine kinase FleS
	?	NC_002947	4963267 =	52 (1.050)					coding (388/1218 nt)	fleS	two‑component system sensor histidine kinase FleS

GCAACCATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATC  >  NC_002947/4963086‑4963376                                                                                                                                                  |                                                                                                                                                  gCAACCATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTcgcg                                                                                                                                                >  1:306487/1‑149 (MQ=255) aacctgctggacttgctgcctggcggggtgatcgtgatcgatggtcagggcctggtgcgcgaagccaacccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgccccgcg                                                                                                                                                <  5:286222‑M1/4‑1 (MQ=255)  acctgctggacttgctgcctggcggggtgatcgtgatcgatggtcagggcctggtgcgcgaagccaacccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCgcgc                                                                                                                                               >  4:295523‑M1/145‑149 (MQ=255)   cctgctggacttgctgcctggcggggtgatcgtgatcgatggtcagggcctggtgcgcgaagccaacccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCgcgc                                                                                                                                               <  3:28033‑M1/5‑1 (MQ=255)   aaCCATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCa                                                                                                                                              <  8:152430/149‑1 (MQ=255)     ccATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGc                                                                                                                                            <  8:3334/149‑1 (MQ=255)     ccATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGc                                                                                                                                            <  3:70394/149‑1 (MQ=255)       aTGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCga                                                                                                                                          <  3:23565/149‑1 (MQ=255)       aTGCGCCCCAACGACGACAGCCGCTCGCGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCga                                                                                                                                          <  3:205650/149‑1 (MQ=255)        tGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGc                                                                                                                                            >  2:15601/1‑146 (MQ=255)             cccAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTc                                                                                                                                    >  5:99627/1‑149 (MQ=255)             cccAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTc                                                                                                                                    >  5:254186/1‑149 (MQ=255)             cccAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTc                                                                                                                                    >  3:214897/1‑149 (MQ=255)               cAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGt                                                                                                                                  >  8:4506/1‑149 (MQ=255)               cAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGt                                                                                                                                  >  4:9527/1‑149 (MQ=255)                aaCGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTg                                                                                                                                 <  1:211934/149‑1 (MQ=255)                aaCGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTg                                                                                                                                 >  6:178971/1‑149 (MQ=255)                      gacAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcgtc                                                                                                                           >  2:169038/1‑149 (MQ=255)                      gacAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcgtc                                                                                                                           <  1:184939/149‑1 (MQ=255)                      gacAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcg                                                                                                                             >  7:218960/1‑147 (MQ=255)                      gacAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcg                                                                                                                             <  8:218960/147‑1 (MQ=255)                      gacAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGAGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGAGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcgtc                                                                                                                           >  6:56595/1‑149 (MQ=255)                         aGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGGGCAGCGAGCCTTCGTGGCCgtcgtc                                                                                                                        >  2:272403/1‑149 (MQ=255)                           ccGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCt                                                                                                                      >  5:18026/1‑149 (MQ=255)                            cGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGGGCAGCGAGACTTCGTGGCCGTCGTCCtt                                                                                                                     <  1:185095/149‑1 (MQ=255)                                 gTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACGAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGcgcg                                                                                                                >  1:217593/1‑149 (MQ=255)                                 gTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGcgcg                                                                                                                >  5:99483/1‑149 (MQ=255)                                  tGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCgg                                                                                                               <  2:106704/149‑1 (MQ=255)                                  tGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCgg                                                                                                               <  7:170490/149‑1 (MQ=255)                                   tgatcgatggtcagggcctggtgcgcgaagccaacccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCggg                                                                                                              >  7:188738‑M1/112‑149 (MQ=255)                                   ggCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCggg                                                                                                              >  6:151622/1‑149 (MQ=255)                                     atcgatggtcagggcctggtgcgcgaagccaacccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCgggg                                                                                                             >  6:76017‑M1/110‑148 (MQ=255)                                      gAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGTGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGc                                                                                                            >  2:254420/1‑148 (MQ=255)                                        gCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCaaa                                                                                                         <  5:56595/149‑1 (MQ=255)                                              tGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACg                                                                                                   >  4:43411/1‑149 (MQ=255)                                                   cTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCg                                                                                               <  2:306487/148‑1 (MQ=255)                                                   cTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCg                                                                                               >  2:309115/1‑148 (MQ=255)                                                     ggAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGAt                                                                                             >  1:212019/1‑148 (MQ=255)                                                         gCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCaaa                                                                                                         <  5:233371/132‑1 (MQ=255)                                                         gCGACGGGTTTCAGTCAGGTCGTTGAGCACCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCaaa                                                                                                         >  6:233371/1‑132 (MQ=255)                                                          gcgaagccaacccggccgcctgcgagttgctcgggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCgggg                                                                                                             <  1:208496‑M1/39‑1 (MQ=255)                                                           gcgaagccaacccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCgggg                                                                                                             >  2:208496‑M1/88‑126 (MQ=255)                                                           gACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTgg                                                                                      >  1:198049/1‑149 (MQ=255)                                                                gTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCca                                                                                 <  6:99627/149‑1 (MQ=255)                                                                 tttCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCga                                                                                                                                          <  3:186535/91‑1 (MQ=255)                                                                 tttCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCga                                                                                                                                          >  4:186535/1‑91 (MQ=255)                                                                    caggcaggTCGTTGAGCAGCACCACTTGGCCCGGCTCGGCATCCAGGGCGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTCCGGGCGATCACCTGGCGCCACAAt                                                                             <  7:302558/149‑1 (MQ=255)                                                                       tcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTgg                                                                          >  3:291891/1‑149 (MQ=255)                                                                       tcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTgg                                                                          <  5:31953/149‑1 (MQ=255)                                                                         agGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGTAAAGCTACGGGCGATCACCTGGCGCCACAATTGGcc                                                                        <  6:254186/149‑1 (MQ=255)                                                                         agGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGcc                                                                        <  1:169038/149‑1 (MQ=255)                                                                          ggTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAATCTACGGGCGATCACCTGGCGCCACAATTGGCCg                                                                       <  5:151622/149‑1 (MQ=255)                                                                               ttGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCag                                                                  <  6:99483/149‑1 (MQ=255)                                                                                    cagcaCCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCt                                                             >  8:261825/1‑149 (MQ=255)                                                                                      gcaCCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCa                                                           >  1:166214/1‑149 (MQ=255)                                                                                        aCCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCaga                                                                 <  4:272104/141‑1 (MQ=255)                                                                                        aCCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCaga                                                                 >  3:272104/1‑141 (MQ=255)                                                                                         ccAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCCCCg                                                        >  4:68505/1‑149 (MQ=255)                                                                                          cAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGa                                                       <  4:214897/149‑1 (MQ=255)                                                                                           aaTTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGTGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAg                                                      <  1:254420/149‑1 (MQ=255)                                                                                           aaTTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGgcg                                                                                    <  4:107725/119‑1 (MQ=255)                                                                                           aaTTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGgcg                                                                                    >  3:107725/1‑119 (MQ=255)                                                                                            aTTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGc                                                     <  2:212019/149‑1 (MQ=255)                                                                                                    ggCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCa                                             <  7:261825/149‑1 (MQ=255)                                                                                                      cTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAgg                                           <  7:106504/149‑1 (MQ=255)                                                                                                          gCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAggcggc                                       >  1:206771/1‑149 (MQ=255)                                                                                                              ccAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCggg                                   >  3:111115/1‑149 (MQ=255)                                                                                                                aGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                 <  1:15601/149‑1 (MQ=255)                                                                                                                aGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                 <  2:206771/149‑1 (MQ=255)                                                                                                                aGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                 <  3:9527/149‑1 (MQ=255)                                                                                                                 gTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGTAGGCGGCCGGGTTg                                <  5:178971/149‑1 (MQ=255)                                                                                                                        ggTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTcgc                         <  1:309115/149‑1 (MQ=255)                                                                                                                        ggTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTcgc                         <  7:4506/149‑1 (MQ=255)                                                                                                                           ggCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCa                      >  8:137580/1‑149 (MQ=255)                                                                                                                           ggCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCa                      >  4:28033/1‑149 (MQ=255)                                                                                                                                    cAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCt             >  6:253088/1‑149 (MQ=255)                                                                                                                                      ggcggcGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGa           <  6:18026/149‑1 (MQ=255)                                                                                                                                       gcggcgACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGAc          <  7:137580/149‑1 (MQ=255)                                                                                                                                         ggcgACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCa        >  6:113455/1‑149 (MQ=255)                                                                                                                                         ggcgACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCa        <  3:43411/149‑1 (MQ=255)                                                                                                                                          gcgACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCAt       >  5:23223/1‑149 (MQ=255)                                                                                                                                           cgACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCAt       >  8:13636/1‑148 (MQ=255)                                                                                                                                           cgACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCAt       <  7:13636/148‑1 (MQ=255)                                                                                                                                               cGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATcgatc  <  2:166214/149‑1 (MQ=255)                                                                                                                                               cGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATcgat   >  6:286222/1‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                  GCAACCATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATC  >  NC_002947/4963086‑4963376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.