New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5163651 = | 54 (1.040) | 3 (0.060) | 3/254 | NT | 5.7% | coding (200/1173 nt) | PP_4545 | beta‑ketodecanoyl‑ACP synthase |
? | NC_002947 | 5163683 = | 48 (0.970) | coding (168/1173 nt) | PP_4545 | beta‑ketodecanoyl‑ACP synthase |
TTTCACACAGCACCGACGGCTCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATG > NC_002947/5163505‑5163796 | tttCACACAGCACCGACGGCTCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGcgcc > 5:199774/1‑149 (MQ=255) gatggcctttgaccagaggaacgaccgtgcataacgtcgtgatcagcggcaccggcctgtacaccccggcccagagcatttccaacgaagagctggtggcttccttcaatgcctggtcgcagcagttcaaccaggacaacgctgccgc < 6:146061‑M1/5‑1 (MQ=255) ccGACGGCTCATCTTTGCTGCGCTCGGGCCGGCTCGGCTTCATGCGCTGCGTGTCTAGGATACCGGCATTGTCCTTGACAAAGCGGCTCTTGATCCCAGAGGCCTTTTCTATAACCGCCGCGTCTGATATCGGCGCCGCCTCGACTTCa < 6:88794/149‑1 (MQ=255) gACGGCTCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCgccgcc > 1:102754/1‑138 (MQ=255) gACGGCTCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCgccgcc < 2:102754/138‑1 (MQ=255) ccGGCTCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCACGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCCCcg > 5:35954/2‑149 (MQ=255) aCGGCTCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACcg > 2:262353/1‑149 (MQ=255) ggCTCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACcgcg > 5:127370/1‑149 (MQ=255) tCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTc > 3:80195/1‑149 (MQ=255) tCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTc > 8:26066/1‑149 (MQ=255) aTCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGa > 7:272551/1‑149 (MQ=255) gTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATg < 7:26066/148‑1 (MQ=255) tgcGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATggcgg > 5:138144/1‑147 (MQ=255) gctcTCGGGCAGGCGCGGCTGCTTGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGAGGCCCGCGGCCTTTTCGATAAACGCCGCGGCGGCGCGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAg < 5:248785/146‑1 (MQ=255) taacgtcgtgatcagcggcaccggcctgtacaccccggcccagagcatttccaacgaagagctggtggcttccttcaatgcctggtcgcagcagttcaaccaggacaacgctGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGt > 5:231238‑M1/113‑149 (MQ=255) cGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTg > 8:185168/1‑149 (MQ=255) gggCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCGTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCGCGATGGCGGCAGcagagc > 6:248785/1‑144 (MQ=255) aGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTg > 6:41537/1‑149 (MQ=255) ggCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTgg < 7:185168/149‑1 (MQ=255) gcgcGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGt > 6:283911/1‑149 (MQ=255) aTGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAActgctg > 7:69969/1‑149 (MQ=255) tGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACtgctgc < 6:138144/149‑1 (MQ=255) cggcctgtacaccccggcccagagcatttccaacgaagagctggtggcttccttcaatgcctggtcgcagcagttcaaccaggacaacgctGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCg < 6:42135‑M1/36‑1 (MQ=255) cggcctgtacaccccggcccagagcatttccaacgaagagctggtggcttccttcaatgcctggtcgcagcagttcaaccaggacaacgctGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCg > 5:42135‑M1/92‑127 (MQ=255) gTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCAt < 3:239263/149‑1 (MQ=255) tCGAGGATACGGGCCTTGTCCATGACAAAGGGGCTCTTGAGGCCCGTGGCCTTTTCGATAAACGCGGCGGCGGTTCGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCAtt < 1:262353/149‑1 (MQ=255) tCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCAtt > 7:154116/1‑149 (MQ=255) gAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTg > 6:105608/1‑148 (MQ=255) aGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaa < 4:80195/149‑1 (MQ=255) aGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaa < 6:331031/149‑1 (MQ=255) gCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGccac > 7:299480/1‑149 (MQ=255) ttGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAActgct > 4:51969/1‑121 (MQ=255) ttGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAActgct < 3:51969/121‑1 (MQ=255) aTGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTc > 4:205385/1‑149 (MQ=255) aTGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTc > 1:254668/1‑149 (MQ=255) aCAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGt < 8:69969/148‑1 (MQ=255) aGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaagg > 3:192061/1‑126 (MQ=255) aGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaagg < 4:192061/126‑1 (MQ=255) gCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTAGTCCTGGtt > 7:125971/1‑96 (MQ=255) ctctTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGATAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGct < 5:167526/149‑1 (MQ=255) ctctTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaagg < 4:261016/121‑1 (MQ=255) ctctTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaagg > 3:261016/1‑121 (MQ=255) tctTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGctc > 8:113212/1‑149 (MQ=255) gCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCg > 1:96665/1‑149 (MQ=255) ccGTGGCCTTTTCTTTAAACGACGCGTCGTATCGCGGCGCCGCCTCTACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTTCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCggg < 8:272551/149‑1 (MQ=255) ccGAGGCCTTTTCGATAAACGCCGCGTCGTAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCggg < 3:205385/149‑1 (MQ=255) ccGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCggg < 5:105608/149‑1 (MQ=255) ccGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCggg < 5:41537/149‑1 (MQ=255) gAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGgt < 2:254668/149‑1 (MQ=255) ggCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGgtgt < 8:154116/149‑1 (MQ=255) cTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTa > 1:200912/1‑147 (MQ=255) cTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACa < 5:283911/149‑1 (MQ=255) ttttCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGACGGGGTGTACAg > 4:95730/1‑149 (MQ=255) gccgcGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCt < 8:299480/149‑1 (MQ=255) ccgcGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCg > 7:115118/1‑126 (MQ=255) ccgcGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCg < 8:115118/126‑1 (MQ=255) ccgcGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCt > 4:62794/1‑148 (MQ=255) cgTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATc < 7:113212/149‑1 (MQ=255) agagCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCacgacg > 3:187974/1‑149 (MQ=255) gcgcCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATg > 5:146061/1‑148 (MQ=255) | TTTCACACAGCACCGACGGCTCATCGTTGCTGCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATG > NC_002947/5163505‑5163796 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |