New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5163651 =	54 (1.040)	3 (0.060)	3/254	NT	5.7%	coding (200/1173 nt)	PP_4545	beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5163683 =	48 (0.970)					coding (168/1173 nt)	PP_4545	beta‑ketodecanoyl‑ACP synthase

GCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATGCACGGTCGTTCCTCTGGTCAAAGGCCATC  >  NC_002947/5163536‑5163825                                                                                                                                                    |                                                                                                                                               gctcTCGGGCAGGCGCGGCTGCTTGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGAGGCCCGCGGCCTTTTCGATAAACGCCGCGGCGGCGCGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAg                                                                                                                                               <  5:248785/146‑1 (MQ=255)    taacgtcgtgatcagcggcaccggcctgtacaccccggcccagagcatttccaacgaagagctggtggcttccttcaatgcctggtcgcagcagttcaaccaggacaacgctGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGt                                                                                                                                            >  5:231238‑M1/113‑149 (MQ=255)      cGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTg                                                                                                                                          >  8:185168/1‑149 (MQ=255)       gggCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCGTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCGCGATGGCGGCAGcagagc                                                                                                                                         >  6:248785/1‑144 (MQ=255)           aGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTg                                                                                                                                     >  6:41537/1‑149 (MQ=255)            ggCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTgg                                                                                                                                    <  7:185168/149‑1 (MQ=255)             gcgcGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGt                                                                                                                                   >  6:283911/1‑149 (MQ=255)                       aTGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAActgctg                                                                                                                         >  7:69969/1‑149 (MQ=255)                        tGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACtgctgc                                                                                                                        <  6:138144/149‑1 (MQ=255)                         cggcctgtacaccccggcccagagcatttccaacgaagagctggtggcttccttcaatgcctggtcgcagcagttcaaccaggacaacgctGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCg                                                                                                                                             <  6:42135‑M1/36‑1 (MQ=255)                         cggcctgtacaccccggcccagagcatttccaacgaagagctggtggcttccttcaatgcctggtcgcagcagttcaaccaggacaacgctGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCg                                                                                                                                             >  5:42135‑M1/92‑127 (MQ=255)                                  gTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCAt                                                                                                              <  3:239263/149‑1 (MQ=255)                                   tCGAGGATACGGGCCTTGTCCATGACAAAGGGGCTCTTGAGGCCCGTGGCCTTTTCGATAAACGCGGCGGCGGTTCGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCAtt                                                                                                             <  1:262353/149‑1 (MQ=255)                                   tCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCAtt                                                                                                             >  7:154116/1‑149 (MQ=255)                                     gAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTg                                                                                                            >  6:105608/1‑148 (MQ=255)                                      aGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaa                                                                                                          <  4:80195/149‑1 (MQ=255)                                      aGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaa                                                                                                          <  6:331031/149‑1 (MQ=255)                                               gCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGccac                                                                                                 >  7:299480/1‑149 (MQ=255)                                                  ttGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAActgct                                                                                                                          >  4:51969/1‑121 (MQ=255)                                                  ttGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAActgct                                                                                                                          <  3:51969/121‑1 (MQ=255)                                                        aTGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTc                                                                                        >  4:205385/1‑149 (MQ=255)                                                        aTGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTc                                                                                        >  1:254668/1‑149 (MQ=255)                                                           aCAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGt                                                                                      <  8:69969/148‑1 (MQ=255)                                                               aGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaagg                                                                                                        >  3:192061/1‑126 (MQ=255)                                                               aGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaagg                                                                                                        <  4:192061/126‑1 (MQ=255)                                                                   gCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTAGTCCTGGtt                                                                                                                                  >  7:125971/1‑96 (MQ=255)                                                                    ctctTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGATAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGct                                                                            <  5:167526/149‑1 (MQ=255)                                                                    ctctTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaagg                                                                                                        >  3:261016/1‑121 (MQ=255)                                                                    ctctTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTgaagg                                                                                                        <  4:261016/121‑1 (MQ=255)                                                                     tctTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGctc                                                                           >  8:113212/1‑149 (MQ=255)                                                                            gCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCg                                                                    >  1:96665/1‑149 (MQ=255)                                                                              ccGTGGCCTTTTCTTTAAACGACGCGTCGTATCGCGGCGCCGCCTCTACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTTCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCggg                                                                  <  8:272551/149‑1 (MQ=255)                                                                              ccGAGGCCTTTTCGATAAACGCCGCGTCGTAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCggg                                                                  <  3:205385/149‑1 (MQ=255)                                                                              ccGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCggg                                                                  <  5:105608/149‑1 (MQ=255)                                                                              ccGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCggg                                                                  <  5:41537/149‑1 (MQ=255)                                                                                gAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGgt                                                                <  2:254668/149‑1 (MQ=255)                                                                                  ggCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGgtgt                                                              <  8:154116/149‑1 (MQ=255)                                                                                     cTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTa                                                             >  1:200912/1‑147 (MQ=255)                                                                                     cTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACa                                                           <  5:283911/149‑1 (MQ=255)                                                                                      ttttCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGACGGGGTGTACAg                                                          >  4:95730/1‑149 (MQ=255)                                                                                                  gccgcGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCt                                              <  8:299480/149‑1 (MQ=255)                                                                                                   ccgcGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCg                                                                    <  8:115118/126‑1 (MQ=255)                                                                                                   ccgcGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCg                                                                    >  7:115118/1‑126 (MQ=255)                                                                                                   ccgcGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCt                                              >  4:62794/1‑148 (MQ=255)                                                                                                      cgTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATc                                          <  7:113212/149‑1 (MQ=255)                                                                                                            agagCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCacgacg                                    >  3:187974/1‑149 (MQ=255)                                                                                                               acgctgccgccatcgagcgcggtgaagtcgaggcggcAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTa                                 >  5:231238‑M2/38‑149 (MQ=255)                                                                                                                cgctgccgccatcgagcgcggtgaagtcgaggcggcAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCg                                                      >  5:42135‑M2/37‑127 (MQ=255)                                                                                                                cgctgccgccatcgagcgcggtgaagtcgaggcggcAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCg                                                      <  6:42135‑M2/91‑1 (MQ=255)                                                                                                                  gcgcCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATg                               >  5:146061/1‑148 (MQ=255)                                                                                                                           cGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATGCACGGTCGtt                     >  6:312753/1‑149 (MQ=255)                                                                                                                             aCTTCACCGCGCTCGATGGCGGCAGAGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCATCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACTACGTTATGCACGGTCGTTc                    >  6:29028/1‑148 (MQ=255)                                                                                                                                tCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCg                                                      <  3:265041/111‑1 (MQ=255)                                                                                                                                tCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCg                                                      >  4:265041/1‑111 (MQ=255)                                                                                                                                 cACCGCGCTCGATGGCGGCAGCGTTGTCCTGGGTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATGCACGGTCGTTCctc                 <  4:63337/147‑1 (MQ=255)                                                                                                                                     gcgcTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATGCACGGTCGTTCCTCTGGTc            >  4:195637/1‑148 (MQ=255)                                                                                                                                           gATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATGCACGGTCGTTCCTCTGGTCAAAGGcc     <  2:200912/149‑1 (MQ=255)                                                                                                                                               gcggcAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATGCACGGTCGTTCCTCTGGTCAAAGGCCATc  <  6:146061‑M2/143‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                               GCGCTCGGGCAGGCGCGGCTTCATGCGCTGCGGGTCGAGGATACCGGCCTTGTCCATGACAAAGCGGCTCTTGATGCCCGAGGCCTTTTCGATAAACGCCGCGTCGGAGAGCGGCGCCGCCTCGACTTCACCGCGCTCGATGGCGGCAGCGTTGTCCTGGTTGAACTGCTGCGACCAGGCATTGAAGGAAGCCACCAGCTCTTCGTTGGAAATGCTCTGGGCCGGGGTGTACAGGCCGGTGCCGCTGATCACGACGTTATGCACGGTCGTTCCTCTGGTCAAAGGCCATC  >  NC_002947/5163536‑5163825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.