New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5196117	57 (1.090)	3 (0.060)	3/250	NT	5.2%	coding (398/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	= 5196133	56 (1.150)					coding (382/690 nt)	ybgJ	allophanate hydrolase subunit 1

TTCCAGCCACCCGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCGGGATCTCGTGTCGGCGGCC  >  NC_002947/5195970‑5196262                                                                                                                                                    |                                                                                                                                                  ttCCAGCCACCCGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGc                                                                                                                                                  <  7:27643/149‑1 (MQ=255)     aGCCACCCGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAg                                                                                                                                              >  4:219974/1‑149 (MQ=255)      gCCACCCGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGc                                                                                                                                             <  1:305936/149‑1 (MQ=255)         aCCCGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGTCGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCa                                                                                                                                          <  5:261384/149‑1 (MQ=255)         aCCCGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGGGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCa                                                                                                                                          <  1:229132/149‑1 (MQ=255)         aCCCGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGcc                                                                                                                                            >  7:107463/1‑147 (MQ=255)         aCCCGGCAGTATCGCCGGGTGGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGcc                                                                                                                                            >  1:23101/1‑147 (MQ=255)           ccGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAg                                                                                                                                              >  8:286624/1‑143 (MQ=255)           ccGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAg                                                                                                                                              <  7:286624/143‑1 (MQ=255)            cGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGTCCATGAAGCCGAAACCCGGTGCGAAGCCCAggg                                                                                                                                       <  5:176624/149‑1 (MQ=255)                     tGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAAcaccg                                                                                                                              <  5:96698‑M2/149‑6 (MQ=255)                     tGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAAcaccg                                                                                                                              <  5:109866‑M2/149‑6 (MQ=255)                       ccGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAAcaccggg                                                                                                                            <  3:295093‑M2/149‑8 (MQ=255)                       ccGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAAcaccgg                                                                                                                             >  6:109866‑M2/1‑142 (MQ=255)                       ccGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAAcaccgg                                                                                                                             >  6:316558‑M2/1‑142 (MQ=255)                       ccGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAAcaccgg                                                                                                                             >  8:107463‑M2/1‑142 (MQ=255)                          ggTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTaa                                                                                                                         >  1:232807/1‑149 (MQ=255)                               gccgccGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGtttgccctgggcttcgcaccgggtttcggct                                                                                                                    <  2:270834‑M1/149‑32 (MQ=255)                                  gccgTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGtt                                                                                                                  >  8:250218/1‑148 (MQ=255)                                     gTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCa                                                                                                                >  2:110250/1‑147 (MQ=255)                                     gTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCa                                                                                                                <  1:110250/147‑1 (MQ=255)                                          gcgcTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGt                                                                                                            <  6:96698/146‑1 (MQ=255)                                             cTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGtttgccctgggcttcgcaccgggtttc                                                                                                                        >  7:208019‑M1/1‑104 (MQ=255)                                             cTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGtttgccctgggcttcgcaccgggtttc                                                                                                                        <  8:208019‑M1/131‑28 (MQ=255)                                                ggCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCg                                                                                                     <  7:204492/147‑1 (MQ=255)                                                ggCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGaa                                                                                                   >  5:78579/1‑149 (MQ=255)                                                ggCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGa                                                                                                    <  7:195861/148‑1 (MQ=255)                                                   aaTACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACaa                                                                                                >  5:232464/1‑149 (MQ=255)                                                      aCCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAAtct                                                                                             >  5:62633/1‑149 (MQ=255)                                                          aCGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGc                                                                                         <  4:4400/149‑1 (MQ=255)                                                          aCGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGc                                                                                         <  8:12187/149‑1 (MQ=255)                                                             cTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTc                                                                                      <  3:219974/149‑1 (MQ=255)                                                                cccGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACt                                                                                   <  4:69288/149‑1 (MQ=255)                                                                 ccgcccCCACGCCCTTGCGTCGGGTACACAGACGAGGGCTCGCCAGGCGCTCGACGACCAGGCCCATGAAGCCGAAACCCGGAGCGAACCCCACGGCAAACACCCGGTAAACCCCATCACCGTCCTACCGAACAAACTCCGCATCACt                                                                                   >  6:27291/1‑148 (MQ=255)                                                                        cACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGc                                                                           >  7:166641/1‑149 (MQ=255)                                                                         aCGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCt                                                                          >  3:269408/1‑149 (MQ=255)                                                                            ctcTTGCGTGGGGTAATCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCTCTGCg                                                                       <  6:327024/147‑1 (MQ=255)                                                                             aagcgCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCGAGCGAACAATCTCCGCTTCTCTCAAGCCGCTGCgg                                                                      >  8:49191/5‑149 (MQ=255)                                                                                   gTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGcc                                                                <  7:250218/149‑1 (MQ=255)                                                                                    tGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAACCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCGAGCGAACAATCTCCGCTTCTCTCAAGCCGCTGCGGGCTGCCa                                                               <  7:49191/149‑1 (MQ=255)                                                                                      gggTACTCCGACGAGGGCTGGGCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACTATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAg                                                              <  5:27291/148‑1 (MQ=255)                                                                                       ggTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGca                                                            <  1:193230/149‑1 (MQ=255)                                                                                       ggTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGca                                                            <  4:269408/149‑1 (MQ=255)                                                                                        gTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGcac                                                           <  5:89351/149‑1 (MQ=255)                                                                                        gTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGca                                                            >  5:271751/1‑148 (MQ=255)                                                                                            tCAGACGAGGGCTGGCGAGGCTCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTc                                                                                      <  8:288303/118‑1 (MQ=255)                                                                                            tCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAgg                                                        >  1:65594/1‑148 (MQ=255)                                                                                            tCAGACGAGGGCTGGCCAGGCGCTCGTCGACCACGCACATGAAGCCGAAACCAGGTGCGAAGCCCAGGGCAAACACCGGGTAATCTCGTTCACCGTGCAAGCGAACAATCTCCGCTTc                                                                                      >  7:288303/1‑118 (MQ=255)                                                                                              aGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAg                                                     >  7:84024/1‑149 (MQ=255)                                                                                              aGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCACGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCa                                                      <  2:112164/148‑1 (MQ=255)                                                                                                    gggCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCggg                                               >  2:183829/1‑149 (MQ=255)                                                                                                     ggCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCgggg                                              <  6:232464/149‑1 (MQ=255)                                                                                                      gCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCATTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGc                                             >  6:325382/1‑149 (MQ=255)                                                                                                       cTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGcc                                            <  6:78579/149‑1 (MQ=255)                                                                                                          gCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGa                                          >  2:165546/1‑148 (MQ=255)                                                                                                           ccAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGaca                                        >  3:80380/1‑149 (MQ=255)                                                                                                              ggCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTg                                     <  8:166641/149‑1 (MQ=255)                                                                                                                   tcgtcgACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGcgtc                                >  8:170356/1‑149 (MQ=255)                                                                                                                   tcgacgACCACGCCCATGAAGCCGAAACCCCGAGCTAAGCCCACGGCAAACACCCGGAAATCGCGTTCACCGTGCAAGCGAACAAACTCAGCTTCAATAAACCCGATGCGAGCAGCCAACACACGCAGCTCTCGCCCGACACAGCcgtc                                >  8:241579/1‑149 (MQ=255)                                                                                                                     gtcgACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGcgtcgt                              <  6:62633/149‑1 (MQ=255)                                                                                                                     gtcgACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGcgtc                                <  4:295093/147‑1 (MQ=255)                                                                                                                           cAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACcaca                        >  5:284342/1‑149 (MQ=255)                                                                                                                              gCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCg                     >  8:278110/1‑149 (MQ=255)                                                                                                                                 cATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCgg                    >  4:157392/1‑147 (MQ=255)                                                                                                                                 cATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCgg                    <  3:157392/147‑1 (MQ=255)                                                                                                                                     aaGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCGGGAtctc              <  2:232807/149‑1 (MQ=255)                                                                                                                                      aGCCGAAACCCGGTGCGAAGCCCAGGGCAAAcaccgggtttcggcttcatgggcctggtcgacgagcgcctggccagccctcgtctgagtaccccacgcaagcgcgtggcggcgggcagcgtgggtattgccgagcgccagacggcggc             <  2:270834‑M2/149‑119 (MQ=255)                                                                                                                                      aGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCGGGAtctc              <  8:84024/148‑1 (MQ=255)                                                                                                                                       gCCTAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCGGGATCTCgt            <  7:241579/149‑1 (MQ=255)                                                                                                                                          gAAACCCGGTGCGAAGCCCAGGGCAAAcaccgggtttcggcttcatgggcctggtcgacgagcgcctggccagccctcgtctgagtaccccacgcaagcgcgtggcggcgggcagcgtgggtattgccgag                           <  8:208019‑M2/131‑105 (MQ=255)                                                                                                                                          gAAACCCGGTGCGAAGCCCAGGGCAAAcaccgggtttcggcttcatgggcctggtcgacgagcgcctggccagccctcgtctgagtaccccacgcaagcgcgtggcggcgggcagcgtgggtattgccgag                           >  7:208019‑M2/1‑27 (MQ=255)                                                                                                                                          gAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCGGGATCTCGTGTc         <  6:284342/149‑1 (MQ=255)                                                                                                                                              cccGGTGtttgccctgggcttcgcaccgggtttcggcttcatgggcctggtcgacgagcgcctggccagccctcgtctgagtaccccacgcaagcgcgtggcggcgggcagcgtgggtattgccgagcgccagacggcggcctacccgg     <  3:295093‑M1/149‑143 (MQ=255)                                                                                                                                               ccGGTGtttgccctgggcttcgcaccgggtttcggcttcatgggcctggtcgacgagcgcctggccagccctcgtctgagtaccccacgcaagcgcgtggcggcgggcagcgtgggtattgccgagcgccagacggcggcctacccgg     >  8:107463‑M1/1‑6 (MQ=255)                                                                                                                                               ccGGTGtttgccctgggcttcgcaccgggtttcggcttcatgggcctggtcgacgagcgcctggccagccctcgtctgagtaccccacgcaagcgcgtggcggcgggcagcgtgggtattgccgagcgccagacggcggcctacccgg     >  6:109866‑M1/1‑6 (MQ=255)                                                                                                                                               ccGGTGtttgccctgggcttcgcaccgggtttcggcttcatgggcctggtcgacgagcgcctggccagccctcgtctgagtaccccacgcaagcgcgtggcggcgggcagcgtgggtattgccgagcgccagacggcggcctacccgg     >  6:316558‑M1/1‑6 (MQ=255)                                                                                                                                               ccGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCGGGATCTCGTGTcggcgg    >  5:6918/1‑149 (MQ=255)                                                                                                                                                cGGTGtttgccctgggcttcgcaccgggtttcggcttcatgggcctggtcgacgagcgcctggccagccctcgtctgagtaccccacgcaagcgcgtggcggcgggcagcgtgggtattgccgagcgccagacggcggcctacccggca   <  5:96698‑M1/149‑145 (MQ=255)                                                                                                                                                cGGTGtttgccctgggcttcgcaccgggtttcggcttcatgggcctggtcgacgagcgcctggccagccctcgtctgagtaccccacgcaagcgcgtggcggcgggcagcgtgggtattgccgagcgccagacggcggcctacccggca   <  5:109866‑M1/149‑145 (MQ=255)                                                                                                                                                 ggTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCGGGATCTCGTGTCGGCGgcc  >  5:242862/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                  TTCCAGCCACCCGGCGATACTGCCGGGTAGGCCGCCGTCTGGCGCTCGGCAATACCCACGCTGCCCGCCGCCACGCGCTTGCGTGGGGTACTCAGACGAGGGCTGGCCAGGCGCTCGTCGACCAGGCCCATGAAGCCGAAACCCGGTGCGAAGCCCAGGGCAAACACCGGGTAATCGCGTTCACCGTGCAAGCGAACAATCTCCGCTTCACTCAAGCCGCTGCGGGCTGCCAGCACAGGCAGCTCGGGGCCGACACTGGCGTCGTACCACACCGGGATCTCGTGTCGGCGGCC  >  NC_002947/5195970‑5196262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.