New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5196392	51 (0.980)	9 (0.190)	8/246	NT	15.5%	coding (123/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	= 5196417	51 (1.060)					coding (98/690 nt)	ybgJ	allophanate hydrolase subunit 1

TCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCG  >  NC_002947/5196249‑5196540                                                                                                                                                |                                                                                                                                                      tcGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAAcgc                                                                                                                                                  >  7:250271/1‑149 (MQ=255)   gtgtCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAAcgcc                                                                                                                                                 <  3:243476/148‑1 (MQ=255)      tCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCg‑cgc                                                                                                                                            <  4:191553/149‑1 (MQ=255)           ggcCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAg                                                                                                                                       >  8:34472/1‑149 (MQ=255)                ccACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGccagccggcgcttgagcgcg                                                                                                                                   >  6:281575‑M1/1‑129 (MQ=255)                 cACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCgg                                                                                                                                 >  4:40571/1‑149 (MQ=255)                 cACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCgg                                                                                                                                 >  8:134530/1‑149 (MQ=255)                      ccTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATATGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGc                                                                                                                            <  6:10048‑M2/149‑2 (MQ=255)                      ccTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGccagccggcgcttgagcgcggcgttc                                                                                                                             >  4:304197‑M1/1‑123 (MQ=255)                          tgtCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGccagccggcgcttgagcgcggcgttcgg                                                                                                                           <  3:304197‑M1/147‑29 (MQ=255)                            tCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCCGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgag                                                                                                                      <  5:99659‑M2/149‑8 (MQ=255)                            tCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGccagccggcgcttgagcgcggcgttcggcga                                                                                                                        <  5:281575‑M1/148‑32 (MQ=255)                              aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagca                                                                                                                    >  4:257355‑M2/1‑140 (MQ=255)                              aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagca                                                                                                                    >  4:252990‑M2/1‑140 (MQ=255)                              aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagca                                                                                                                    <  1:277769‑M2/149‑10 (MQ=255)                              aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGATCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagc                                                                                                                     <  4:36334‑M2/148‑9 (MQ=255)                                 cTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCCGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATcc                                                                                                                 <  6:99659/149‑1 (MQ=255)                                 cTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATcc                                                                                                                 <  7:34472/149‑1 (MQ=255)                                   gCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCAt                                                                                                               >  5:145118/1‑149 (MQ=255)                                     aatccGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATgg                                                                                                             <  8:254653/146‑1 (MQ=255)                                     aaGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGccagccggcgcttgagcgcggcgttcggc                                                                                                                          >  6:280702‑M1/1‑108 (MQ=255)                                     aaGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGccagccggcgcttgagcgcggcgttcggc                                                                                                                          <  5:280702‑M1/137‑30 (MQ=255)                                      aGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGc                                                                                                            <  5:312966/149‑1 (MQ=255)                                       gCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCa                                                                                                           >  4:152968/1‑149 (MQ=255)                                       gCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCa                                                                                                           >  7:214267/1‑149 (MQ=255)                                          gTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGC‑GGCGTTcggcgagcatttgctggacct                                                                                                        >  8:204471‑M2/1‑128 (MQ=255)                                           tCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGtt                                                                                                       <  8:293920/149‑1 (MQ=255)                                              aGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGAc                                                                                                    <  6:145118/149‑1 (MQ=255)                                              aGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGAc                                                                                                    <  8:250271/149‑1 (MQ=255)                                                  ccTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGACCGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGGTGCCCTCa                                                                                                >  5:273577/1‑149 (MQ=255)                                                   cTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCCCAt                                                                                               >  6:322388/1‑149 (MQ=255)                                                           ttCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGccagccggcgcttgagcgcggcgttcggcga                                                                                                                        >  5:42102‑M1/1‑86 (MQ=255)                                                           ttCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGccagccggcgcttgagcgcggcgttcggcga                                                                                                                        <  6:42102‑M1/117‑32 (MQ=255)                                                            tCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGt                                                                                      >  6:23673/1‑149 (MQ=255)                                                              gcgcCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTc                                                                                     <  3:152968/148‑1 (MQ=255)                                                                   cTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAg                                                                               >  8:15297/1‑149 (MQ=255)                                                                   cTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAg                                                                               <  6:81479/149‑1 (MQ=255)                                                                   cTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAg                                                                               <  2:277769/149‑1 (MQ=255)                                                                      gCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATATGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGc                                                                             <  5:10048/148‑1 (MQ=255)                                                                      gCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgag                                                                                                                      >  1:321209‑M2/1‑100 (MQ=255)                                                                      gCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgag                                                                                                                      <  2:321209‑M2/107‑8 (MQ=255)                                                                      gCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAgg                                                                              <  5:162877/147‑1 (MQ=255)                                                                        cTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTa                                                                          >  4:237602/1‑149 (MQ=255)                                                                        cTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTa                                                                          >  3:268364/1‑149 (MQ=255)                                                                            ccTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                      >  4:127900/1‑149 (MQ=255)                                                                             cTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                      >  7:7339/1‑148 (MQ=255)                                                                              tGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                      >  5:202973/1‑147 (MQ=255)                                                                                  gcCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCt                                                                >  7:29938/1‑149 (MQ=255)                                                                                     aGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTc                                                             <  2:65594/149‑1 (MQ=255)                                                                                         gaGACTGCACCATGAGCGTAGTATAAGACGGCAACAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                      <  4:155263/135‑1 (MQ=255)                                                                                         cAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATg                                                         <  7:51088/149‑1 (MQ=255)                                                                                         cAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATg                                                         <  3:36334/149‑1 (MQ=255)                                                                                         cAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCAGCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGAGTACCAt                                                                      >  3:155263/1‑136 (MQ=255)                                                                                          aGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCCCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATgg                                                        <  5:322388/149‑1 (MQ=255)                                                                                              tGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTTACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGAc                                                    >  2:97589/1‑149 (MQ=255)                                                                                                    aTCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGATCAGGCGTACCATCAGGCTGTCGATGGCGACCACTTc                                              >  1:251670/1‑149 (MQ=255)                                                                                                         cGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGAt                                           <  8:7339/147‑1 (MQ=255)                                                                                                           tagtaTAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGATCAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcgc                                       <  2:251670/149‑1 (MQ=255)                                                                                                           tagtaTAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcgc                                       <  7:15297/149‑1 (MQ=255)                                                                                                             gtaTAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCgg                                     <  3:127900/149‑1 (MQ=255)                                                                                                                   gACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtcat                               <  3:237602/149‑1 (MQ=255)                                                                                                                     cGGCACCAGGTCCAGCAAATGCTCGCCGACCGCCG‑CGGTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtcatca                             <  6:108779/149‑1 (MQ=255)                                                                                                                      ggCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtcatca                             >  6:179962/1‑148 (MQ=255)                                                                                                                         aCCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagc                                                                                                                     >  5:3749‑M2/1‑49 (MQ=255)                                                                                                                         aCCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagc                                                                                                                     <  6:3749‑M2/57‑9 (MQ=255)                                                                                                                          ccAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCt                        >  3:227152/1‑149 (MQ=255)                                                                                                                            aGGTCCAGCAAATGCTCGCCGaacgccgcgctcaagcgccggctggcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggac                       >  8:204471‑M1/1‑21 (MQ=255)                                                                                                                              gTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAg                    <  4:268364/149‑1 (MQ=255)                                                                                                                               tCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGc                   <  8:214267/149‑1 (MQ=255)                                                                                                                                        tGCTCGCCGccagccggcgcttgagcgcggcgttcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcct           <  1:277769‑M1/149‑141 (MQ=255)                                                                                                                                        tGCTCGCCGccagccggcgcttgagcgcggcgttcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcct           >  4:252990‑M1/1‑9 (MQ=255)                                                                                                                                        tGCTCGCCGccagccggcgcttgagcgcggcgttcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcct           >  4:257355‑M1/1‑9 (MQ=255)                                                                                                                                        ggCTAGCCGAACGCCG‑CGCGCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTGATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAgg          <  6:273577/148‑1 (MQ=255)                                                                                                                                         gCTCGCCGccagccggcgcttgagcgcggcgttcggcgatcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcct           <  4:36334‑M1/148‑141 (MQ=255)                                                                                                                                         gCTCGCCGccagccggcgcttgagcgcggcgttcggcgagcatttgctggacctggt                                                                                                      <  6:3749‑M1/57‑50 (MQ=255)                                                                                                                                         gCTCGCCGccagccggcgcttgagcgcggcgttcggcgagcatttgctggacctggt                                                                                                      >  5:3749‑M1/1‑8 (MQ=255)                                                                                                                                          cTCGCCGccagccggcgcttgagcgcggcgttcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggc                                                   >  1:321209‑M1/1‑7 (MQ=255)                                                                                                                                          cTCGCCGccagccggcgcttgagcgcggcgttcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggc                                                   <  2:321209‑M1/107‑101 (MQ=255)                                                                                                                                          cTCGCCGccagccggcgcttgagcgcggcgttcggcgagcatttgctggaccgggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctga         <  5:99659‑M1/149‑143 (MQ=255)                                                                                                                                          cTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACgg                                                                                       <  8:94961/70‑1 (MQ=255)                                                                                                                                          cTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACgg                                                                                       >  7:94961/1‑70 (MQ=255)                                                                                                                                           tCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctga        <  5:281575‑M2/148‑118 (MQ=255)                                                                                                                                           tCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaa                                       <  6:42102‑M2/117‑87 (MQ=255)                                                                                                                                           tCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaa                                       >  5:42102‑M2/1‑31 (MQ=255)                                                                                                                                            cGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCCCTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCt      >  5:76752/1‑149 (MQ=255)                                                                                                                                            cGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCt      >  8:280970/1‑149 (MQ=255)                                                                                                                                             gCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggctt                 <  5:280702‑M2/137‑109 (MQ=255)                                                                                                                                             gCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggctt                 >  6:280702‑M2/1‑29 (MQ=255)                                                                                                                                             gCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGGGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTg     >  7:170581/1‑149 (MQ=255)                                                                                                                                              ccGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctgaca      <  3:304197‑M2/147‑120 (MQ=255)                                                                                                                                              ccGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTgg    <  7:278110/149‑1 (MQ=255)                                                                                                                                                gccagccggcgcttgagcgcggcgttcggcgagcatttgctggacctggtgccgtcatatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctgacacagg   <  6:10048‑M1/149‑149 (MQ=255)                                                                                                                                                gAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctgacacagg  >  4:304197‑M2/1‑26 (MQ=255)                                                                                                                                                |                                                                                                                                                      TCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCG  >  NC_002947/5196249‑5196540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.