New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5196392	51 (0.980)	9 (0.190)	8/246	NT	15.5%	coding (123/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	= 5196417	51 (1.060)					coding (98/690 nt)	ybgJ	allophanate hydrolase subunit 1

CCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACCGCCGCCAC  >  NC_002947/5196270‑5196561                                                                                                                                                     |                                                                                                                                                 ccTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATATGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGc                                                                                                                                                 <  6:10048‑M2/149‑2 (MQ=255)       tCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCCGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgag                                                                                                                                           <  5:99659‑M2/149‑8 (MQ=255)         aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagca                                                                                                                                         <  1:277769‑M2/149‑10 (MQ=255)         aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagca                                                                                                                                         >  4:257355‑M2/1‑140 (MQ=255)         aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagca                                                                                                                                         >  4:252990‑M2/1‑140 (MQ=255)         aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGATCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagc                                                                                                                                          <  4:36334‑M2/148‑9 (MQ=255)            cTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCCGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATcc                                                                                                                                      <  6:99659/149‑1 (MQ=255)            cTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATcc                                                                                                                                      <  7:34472/149‑1 (MQ=255)              gCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCAt                                                                                                                                    >  5:145118/1‑149 (MQ=255)                aatccGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATgg                                                                                                                                  <  8:254653/146‑1 (MQ=255)                 aGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGc                                                                                                                                 <  5:312966/149‑1 (MQ=255)                  gCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCa                                                                                                                                >  7:214267/1‑149 (MQ=255)                  gCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCa                                                                                                                                >  4:152968/1‑149 (MQ=255)                     gTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGC‑GGCGTTcggcgagcatttgctggacct                                                                                                                             >  8:204471‑M2/1‑128 (MQ=255)                      tCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGtt                                                                                                                            <  8:293920/149‑1 (MQ=255)                         aGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGAc                                                                                                                         <  6:145118/149‑1 (MQ=255)                         aGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGAc                                                                                                                         <  8:250271/149‑1 (MQ=255)                             ccTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGACCGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGGTGCCCTCa                                                                                                                     >  5:273577/1‑149 (MQ=255)                              cTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCCCAt                                                                                                                    >  6:322388/1‑149 (MQ=255)                                       tCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGt                                                                                                           >  6:23673/1‑149 (MQ=255)                                         gcgcCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTc                                                                                                          <  3:152968/148‑1 (MQ=255)                                              cTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAg                                                                                                    >  8:15297/1‑149 (MQ=255)                                              cTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAg                                                                                                    <  2:277769/149‑1 (MQ=255)                                              cTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAg                                                                                                    <  6:81479/149‑1 (MQ=255)                                                 gCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATATGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGc                                                                                                  <  5:10048/148‑1 (MQ=255)                                                 gCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgag                                                                                                                                           >  1:321209‑M2/1‑100 (MQ=255)                                                 gCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgag                                                                                                                                           <  2:321209‑M2/107‑8 (MQ=255)                                                 gCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAgg                                                                                                   <  5:162877/147‑1 (MQ=255)                                                   cTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTa                                                                                               >  3:268364/1‑149 (MQ=255)                                                   cTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTa                                                                                               >  4:237602/1‑149 (MQ=255)                                                       ccTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                                           >  4:127900/1‑149 (MQ=255)                                                        cTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                                           >  7:7339/1‑148 (MQ=255)                                                         tGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                                           >  5:202973/1‑147 (MQ=255)                                                             gcCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCt                                                                                     >  7:29938/1‑149 (MQ=255)                                                                aGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTc                                                                                  <  2:65594/149‑1 (MQ=255)                                                                    gaGACTGCACCATGAGCGTAGTATAAGACGGCAACAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                                           <  4:155263/135‑1 (MQ=255)                                                                    cAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATg                                                                              <  3:36334/149‑1 (MQ=255)                                                                    cAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATg                                                                              <  7:51088/149‑1 (MQ=255)                                                                    cAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCAGCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGAGTACCAt                                                                                           >  3:155263/1‑136 (MQ=255)                                                                     aGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCCCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATgg                                                                             <  5:322388/149‑1 (MQ=255)                                                                         tGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTTACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGAc                                                                         >  2:97589/1‑149 (MQ=255)                                                                               aTCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGATCAGGCGTACCATCAGGCTGTCGATGGCGACCACTTc                                                                   >  1:251670/1‑149 (MQ=255)                                                                                    cGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGAt                                                                <  8:7339/147‑1 (MQ=255)                                                                                      tagtaTAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGATCAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcgc                                                            <  2:251670/149‑1 (MQ=255)                                                                                      tagtaTAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcgc                                                            <  7:15297/149‑1 (MQ=255)                                                                                        gtaTAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCgg                                                          <  3:127900/149‑1 (MQ=255)                                                                                              gACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtcat                                                    <  3:237602/149‑1 (MQ=255)                                                                                                cGGCACCAGGTCCAGCAAATGCTCGCCGACCGCCG‑CGGTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtcatca                                                  <  6:108779/149‑1 (MQ=255)                                                                                                 ggCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtcatca                                                  >  6:179962/1‑148 (MQ=255)                                                                                                    aCCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagc                                                                                                                                          <  6:3749‑M2/57‑9 (MQ=255)                                                                                                    aCCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagc                                                                                                                                          >  5:3749‑M2/1‑49 (MQ=255)                                                                                                     ccAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCt                                             >  3:227152/1‑149 (MQ=255)                                                                                                         gTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAg                                         <  4:268364/149‑1 (MQ=255)                                                                                                          tCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGc                                        <  8:214267/149‑1 (MQ=255)                                                                                                                   ggCTAGCCGAACGCCG‑CGCGCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTGATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAgg                               <  6:273577/148‑1 (MQ=255)                                                                                                                     cTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACgg                                                                                                            >  7:94961/1‑70 (MQ=255)                                                                                                                     cTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACgg                                                                                                            <  8:94961/70‑1 (MQ=255)                                                                                                                      tCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctga                             <  5:281575‑M2/148‑118 (MQ=255)                                                                                                                      tCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaa                                                            <  6:42102‑M2/117‑87 (MQ=255)                                                                                                                      tCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaa                                                            >  5:42102‑M2/1‑31 (MQ=255)                                                                                                                       cGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCCCTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCt                           >  5:76752/1‑149 (MQ=255)                                                                                                                       cGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCt                           >  8:280970/1‑149 (MQ=255)                                                                                                                        gCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggctt                                      <  5:280702‑M2/137‑109 (MQ=255)                                                                                                                        gCCGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggctt                                      >  6:280702‑M2/1‑29 (MQ=255)                                                                                                                        gCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGGGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTg                          >  7:170581/1‑149 (MQ=255)                                                                                                                         ccGAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctgaca                           <  3:304197‑M2/147‑120 (MQ=255)                                                                                                                         ccGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTgg                         <  7:278110/149‑1 (MQ=255)                                                                                                                           gAACGCCG‑CGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctgacacagg                       >  4:304197‑M2/1‑26 (MQ=255)                                                                                                                             aCGCCG‑CGCTCCAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGGCCCTCGATGGGCTggaggt                     <  7:134530/149‑5 (MQ=255)                                                                                                                              cgccg‑cGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAAt                    <  3:40571/149‑1 (MQ=255)                                                                                                                                 cg‑cgCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctgacacaggcagtgg                 >  6:281575‑M2/1‑20 (MQ=255)                                                                                                                                 cg‑cgCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTg                 <  5:27939/149‑1 (MQ=255)                                                                                                                                  g‑cgcTCAAGCGCCGGGTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGGCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGc                <  6:202973/149‑1 (MQ=255)                                                                                                                                                 gCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACCGCCGCCAc  >  6:300752/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACCGCCGCCAC  >  NC_002947/5196270‑5196561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.