New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5823215 = | 49 (0.940) | 3 (0.060) | 3/258 | NT | 5.1% | coding (151/1176 nt) | yggW | coproporphyrinogen/heterocyclic compound oxidase |
? | NC_002947 | 5823263 = | 64 (1.270) | coding (199/1176 nt) | yggW | coproporphyrinogen/heterocyclic compound oxidase |
TCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTAGAGCAACGTAT > NC_002947/5823069‑5823363 | cccgggttggcttcgagggtgatctcgatgtctggcgcgaacggaatacgttgctctacgccacgcagtagccggccaagggcgctggcactgaacaggcttggcgtaccgccaccgaagaagatcgagctgatcgggcgaccttgTAc < 1:247586‑M1/3‑1 (MQ=255) gAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGt < 3:110857/149‑1 (MQ=255) cccccGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTc < 5:117339/149‑1 (MQ=255) cagcCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAgctgg > 2:5521/1‑149 (MQ=255) cTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGc < 2:222324/149‑1 (MQ=255) ccgccgCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCg > 1:90307/1‑148 (MQ=255) gccgcTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATACCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTa > 7:17334/1‑148 (MQ=255) gttgctctacgccacgcagtagccggccaagggcgctggcactgaacaggcttggcgtaccgccaccgaagaagatcgagctgatcgggcgaccttgTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAg > 3:264427‑M1/98‑149 (MQ=255) tctacgccacgcagtagccggccaagggcgctggcactgaacaggcttggcgtaccgccaccgaagaagatcgagctgatcgggcgaccttgTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTc < 4:300638‑M1/55‑1 (MQ=255) tctacgccacgcagtagccggccaagggcgctggcactgaacaggcttggcgtaccgccaccgaagaagatcgagctgatcgggcgaccttgTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTc > 3:300638‑M1/93‑147 (MQ=255) gcTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGcc > 8:120275/1‑149 (MQ=255) gcTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTGCAACTCCCACGCTGCCGGGCCTGAACTACCGGCAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGcc < 1:205525/149‑1 (MQ=255) cATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATc < 7:11184/148‑1 (MQ=255) aTCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAg > 7:69177/1‑149 (MQ=255) acaTTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTc > 3:277393/1‑148 (MQ=255) cGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGAtcttc < 5:319862/149‑1 (MQ=255) tACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGc > 6:275389/1‑149 (MQ=255) cGCAAATGCCCTTATTGCGACTTCAACTCCCGCGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGtggtgg < 1:23551/149‑1 (MQ=255) gCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGAACAAGGTCGCCCGATCAGCTCGAGCTTCTACCGTGGCgg > 2:314273/1‑148 (MQ=255) aaaTGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGAtcttc < 1:77792/135‑1 (MQ=255) aaaTGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGAtcttc > 2:77792/1‑135 (MQ=255) gCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGcc > 4:149874/1‑148 (MQ=255) ccTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAg > 8:34797/1‑149 (MQ=255) ttGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGt > 1:288859/1‑149 (MQ=255) tGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGtt > 7:172313/1‑149 (MQ=255) gCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGtt < 3:149874/148‑1 (MQ=255) cGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGc > 8:182313/1‑142 (MQ=255) cGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGc < 7:182313/142‑1 (MQ=255) gACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATACCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAg < 8:17334/149‑1 (MQ=255) ttCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCttcttc > 5:41413/1‑120 (MQ=255) ttCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCttcttc < 6:41413/120‑1 (MQ=255) tCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGc > 8:88922/1‑148 (MQ=255) cAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGc < 8:69177/147‑1 (MQ=255) aaCTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAg > 3:112634/1‑149 (MQ=255) tCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGGCCATGCTCGACGCCCTCGACCAGGAGATGCATGCCGTACAAGTACGCCCGATCAGGTCGAGCTTCTTCGTTGGCGGTACGCCAACCCTGTTCAGTGCCAgcg > 1:230968/1‑149 (MQ=255) tCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAgcgc > 8:225299/1‑149 (MQ=255) ccACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGccc > 7:78885/1‑149 (MQ=255) cACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCCTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCt > 3:201375/1‑149 (MQ=255) ccGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCgg > 4:121044/1‑149 (MQ=255) ccGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCgg < 8:78885/149‑1 (MQ=255) ccTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACt < 1:314273/149‑1 (MQ=255) tGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGc > 2:186678/1‑149 (MQ=255) aaCTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGc < 2:230968/147‑1 (MQ=255) aaCTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGt > 5:36642/1‑149 (MQ=255) aaCTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGt < 7:70837/149‑1 (MQ=255) tACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGt > 8:96125/1‑146 (MQ=255) tACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGt < 7:96125/146‑1 (MQ=255) tACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGc > 4:13937/1‑149 (MQ=255) ccGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGc < 5:275389/147‑1 (MQ=255) ccGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCg < 7:88922/148‑1 (MQ=255) ccGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACAAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCg > 1:225454/1‑148 (MQ=255) ggAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTag < 5:197910/149‑1 (MQ=255) ggAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCCTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTag < 4:201375/149‑1 (MQ=255) gAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTaga < 1:5521/149‑1 (MQ=255) cTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGcc < 2:267167/122‑1 (MQ=255) cTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGcc > 1:267167/1‑122 (MQ=255) TACGTCACA‑GCCCTGCTCGCCGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTGCTTCGGTGGCGGTACGCCAAGCCTGTTCCGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTAGAGCAACGTAt < 3:6237‑M1/149‑1 (MQ=255) TACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGccc > 6:14791‑M1/1‑115 (MQ=255) TACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGccc < 5:14791‑M1/115‑1 (MQ=255) | TCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACA‑GCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTAGAGCAACGTAT > NC_002947/5823069‑5823363 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |