New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5823215 =49 (0.940)3 (0.060) 3/258 NT 5.1% coding (151/1176 nt) yggW coproporphyrinogen/heterocyclic compound oxidase
?NC_002947 5823263 = 64 (1.270)coding (199/1176 nt) yggW coproporphyrinogen/heterocyclic compound oxidase

TCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTAGAGCAACGTAT  >  NC_002947/5823069‑5823363
                                                                                                                                                  |                                                                                                                                                     
cccgggttggcttcgagggtgatctcgatgtctggcgcgaacggaatacgttgctctacgccacgcagtagccggccaagggcgctggcactgaacaggcttggcgtaccgccaccgaagaagatcgagctgatcgggcgaccttgTAc                                                                                                                                                     <  1:247586‑M1/3‑1 (MQ=255)
  gAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGt                                                                                                                                                   <  3:110857/149‑1 (MQ=255)
               cccccGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTc                                                                                                                                     <  5:117339/149‑1 (MQ=255)
                                     cagcCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAgctgg                                                                                                               >  2:5521/1‑149 (MQ=255)
                                         cTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGc                                                                                                           <  2:222324/149‑1 (MQ=255)
                                            ccgccgCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCg                                                                                                         >  1:90307/1‑148 (MQ=255)
                                              gccgcTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATACCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTa                                                                                                       >  7:17334/1‑148 (MQ=255)
                                                 gttgctctacgccacgcagtagccggccaagggcgctggcactgaacaggcttggcgtaccgccaccgaagaagatcgagctgatcgggcgaccttgTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAg                                                                                                   >  3:264427‑M1/98‑149 (MQ=255)
                                                      tctacgccacgcagtagccggccaagggcgctggcactgaacaggcttggcgtaccgccaccgaagaagatcgagctgatcgggcgaccttgTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTc                                                                                                <  4:300638‑M1/55‑1 (MQ=255)
                                                      tctacgccacgcagtagccggccaagggcgctggcactgaacaggcttggcgtaccgccaccgaagaagatcgagctgatcgggcgaccttgTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTc                                                                                                >  3:300638‑M1/93‑147 (MQ=255)
                                                       gcTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGcc                                                                                             >  8:120275/1‑149 (MQ=255)
                                                       gcTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTGCAACTCCCACGCTGCCGGGCCTGAACTACCGGCAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGcc                                                                                             <  1:205525/149‑1 (MQ=255)
                                                             cATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATc                                                                                        <  7:11184/148‑1 (MQ=255)
                                                              aTCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAg                                                                                      >  7:69177/1‑149 (MQ=255)
                                                                  acaTTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTc                                                                                   >  3:277393/1‑148 (MQ=255)
                                                                        cGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGAtcttc                                                                            <  5:319862/149‑1 (MQ=255)
                                                                                 tACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGc                                                                   >  6:275389/1‑149 (MQ=255)
                                                                                   cGCAAATGCCCTTATTGCGACTTCAACTCCCGCGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGtggtgg                                                                 <  1:23551/149‑1 (MQ=255)
                                                                                    gCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGAACAAGGTCGCCCGATCAGCTCGAGCTTCTACCGTGGCgg                                                                 >  2:314273/1‑148 (MQ=255)
                                                                                      aaaTGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGAtcttc                                                                            <  1:77792/135‑1 (MQ=255)
                                                                                      aaaTGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGAtcttc                                                                            >  2:77792/1‑135 (MQ=255)
                                                                                          gCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGcc                                                           >  4:149874/1‑148 (MQ=255)
                                                                                            ccTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAg                                                        >  8:34797/1‑149 (MQ=255)
                                                                                                 ttGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGt                                                   >  1:288859/1‑149 (MQ=255)
                                                                                                  tGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGtt                                                  >  7:172313/1‑149 (MQ=255)
                                                                                                   gCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGtt                                                  <  3:149874/148‑1 (MQ=255)
                                                                                                    cGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGc                                                       >  8:182313/1‑142 (MQ=255)
                                                                                                    cGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGc                                                       <  7:182313/142‑1 (MQ=255)
                                                                                                     gACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATACCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAg                                               <  8:17334/149‑1 (MQ=255)
                                                                                                        ttCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCttcttc                                                                         >  5:41413/1‑120 (MQ=255)
                                                                                                        ttCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCttcttc                                                                         <  6:41413/120‑1 (MQ=255)
                                                                                                         tCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGc                                            >  8:88922/1‑148 (MQ=255)
                                                                                                          cAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGc                                            <  8:69177/147‑1 (MQ=255)
                                                                                                           aaCTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAg                                         >  3:112634/1‑149 (MQ=255)
                                                                                                              tCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGGCCATGCTCGACGCCCTCGACCAGGAGATGCATGCCGTACAAGTACGCCCGATCAGGTCGAGCTTCTTCGTTGGCGGTACGCCAACCCTGTTCAGTGCCAgcg                                       >  1:230968/1‑149 (MQ=255)
                                                                                                              tCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAgcgc                                      >  8:225299/1‑149 (MQ=255)
                                                                                                                ccACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGccc                                    >  7:78885/1‑149 (MQ=255)
                                                                                                                 cACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCCTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCt                                   >  3:201375/1‑149 (MQ=255)
                                                                                                                        ccGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCgg                            >  4:121044/1‑149 (MQ=255)
                                                                                                                        ccGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCgg                            <  8:78885/149‑1 (MQ=255)
                                                                                                                             ccTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACt                       <  1:314273/149‑1 (MQ=255)
                                                                                                                               tGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGc                     >  2:186678/1‑149 (MQ=255)
                                                                                                                                 aaCTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGc                     <  2:230968/147‑1 (MQ=255)
                                                                                                                                 aaCTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGt                   >  5:36642/1‑149 (MQ=255)
                                                                                                                                 aaCTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGt                   <  7:70837/149‑1 (MQ=255)
                                                                                                                                    tACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGt                   >  8:96125/1‑146 (MQ=255)
                                                                                                                                    tACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGt                   <  7:96125/146‑1 (MQ=255)
                                                                                                                                    tACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGc                >  4:13937/1‑149 (MQ=255)
                                                                                                                                      ccGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGc                <  5:275389/147‑1 (MQ=255)
                                                                                                                                      ccGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCg               <  7:88922/148‑1 (MQ=255)
                                                                                                                                      ccGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACAAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCg               >  1:225454/1‑148 (MQ=255)
                                                                                                                                        ggAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTag            <  5:197910/149‑1 (MQ=255)
                                                                                                                                        ggAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCCTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTag            <  4:201375/149‑1 (MQ=255)
                                                                                                                                         gAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTaga           <  1:5521/149‑1 (MQ=255)
                                                                                                                                                 cTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGcc                              <  2:267167/122‑1 (MQ=255)
                                                                                                                                                 cTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGcc                              >  1:267167/1‑122 (MQ=255)
                                                                                                                                                  TACGTCACAGCCCTGCTCGCCGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTGCTTCGGTGGCGGTACGCCAAGCCTGTTCCGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTAGAGCAACGTAt  <  3:6237‑M1/149‑1 (MQ=255)
                                                                                                                                                  TACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGccc                                    >  6:14791‑M1/1‑115 (MQ=255)
                                                                                                                                                  TACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGccc                                    <  5:14791‑M1/115‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
TCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCACATTCCGTGGTGCGTACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTGGCTGCCGTACAAGGTCGCCCGATCAGCTCGATCTTCTTCGGTGGCGGTACGCCAAGCCTGTTCAGTGCCAGCGCCCTTGGCCGGCTACTGCGTGGCGTAGAGCAACGTAT  >  NC_002947/5823069‑5823363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.