New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 142358 | 46 (0.880) | 3 (0.060) | 3/256 | NT | 6.0% | coding (302/822 nt) | PP_0134 | hypothetical protein |
? | NC_002947 | = 142391 | 50 (1.000) | coding (335/822 nt) | PP_0134 | hypothetical protein |
GGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGCCGAAGCCAAGGAGCTGG > NC_002947/142243‑142531 | ggTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTgga < 3:173820/149‑1 (MQ=255) aGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAggac > 6:156874‑M2/1‑145 (MQ=255) ggTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAggacg < 4:141779‑M2/149‑6 (MQ=255) tGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGt > 8:229557/1‑148 (MQ=255) aaCGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCt > 2:227510/1‑149 (MQ=255) cGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTgg > 2:302792/1‑149 (MQ=255) cGAGCGGCAGCTGGCCGAGGATGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGcggcgg < 7:57070/149‑1 (MQ=255) gAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGt > 7:248085/1‑149 (MQ=255) gAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGt > 4:278930/1‑149 (MQ=255) gAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGt < 3:229464/149‑1 (MQ=255) ggCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATc < 5:173631/149‑1 (MQ=255) gCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATcc > 1:128924/1‑149 (MQ=255) aGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGGAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGt > 3:36948/1‑149 (MQ=255) cTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGc < 4:172908/149‑1 (MQ=255) ccGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCgg < 3:278930/149‑1 (MQ=255) gAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCt < 3:271035/149‑1 (MQ=255) gTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTtgtg < 4:254531/149‑1 (MQ=255) ggCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTtgtg > 3:262021/1‑147 (MQ=255) gCCCGTGCTACCCGCGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGAAGTGACCCTCGCGGCGGTGATCCGTGCACGGCTGTTGTGCAg > 6:3502/1‑149 (MQ=255) ccGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGcc > 6:261598/1‑149 (MQ=255) ccGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCg < 4:262021/149‑1 (MQ=255) ggCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGGAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGaaaa < 7:268925/149‑1 (MQ=255) gCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAg < 8:115268/149‑1 (MQ=255) gAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCAcc > 4:196580/1‑149 (MQ=255) gAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCAc < 1:302792/148‑1 (MQ=255) gTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAg > 6:30792/1‑148 (MQ=255) gagaACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGt < 8:19926/149‑1 (MQ=255) gCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAgg < 7:229557/149‑1 (MQ=255) gCTAAATGCCCTTCTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTTCGCCCAGCGGCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCGGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAgg < 3:108718/149‑1 (MQ=255) cTCAATGCCCAACTGGTGGAGCGTCCGCAGGATCTGCGTGCCTACGCCCAGCGCCTGGATGACGTGACCCTGGCGGCGGTTATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAg < 5:3502/147‑1 (MQ=255) aaTGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGgt < 3:196580/147‑1 (MQ=255) aTGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGtgtg < 5:261598/149‑1 (MQ=255) ccAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGa > 5:109466/1‑149 (MQ=255) tggtggAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACACTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAATGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTg > 6:186828/1‑149 (MQ=255) tggtggAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACACTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTg > 6:306573/1‑149 (MQ=255) tggtggAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACACTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTg > 6:191336/1‑149 (MQ=255) gtggAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAggacgctccaccagttgggcattgagctgcagcaggttctctacctgttcgatgccccgggtagcacgggccacgtcctcggccagctgccgctcgacctcgttc < 2:60411‑M2/149‑106 (MQ=255) gtggAGCGTCCCCAGGAGCAGCGTGCCTACCCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGAGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCCAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGCCGTTgag > 2:35759/1‑147 (MQ=255) tggAGCGTCCGCGGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGt > 8:299365/1‑149 (MQ=255) gAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAggacgctccaccagttgggcattgagctgcagcaggttctctacctgttcgatgccccgggtagcacgggccacgtcctcggccagctgccgctcgacctcgttctc < 6:21542‑M2/148‑108 (MQ=255) gCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAggacgctccaccagttgggcattgagctgcagcaggttctctacctgttcgatgccccgggtagcacgggccacgtcctcggccagctgccgctcgacctcgttctccac > 1:60411‑M2/1‑39 (MQ=255) gTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAg < 5:30792/149‑1 (MQ=255) gCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGACGTACAACCGATAAGGGACCTATAGAAGTAAAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTc > 1:265895/1‑148 (MQ=255) cAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGc > 3:138686/1‑136 (MQ=255) cAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGc < 4:138686/136‑1 (MQ=255) cAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACACTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGa < 5:306573/149‑1 (MQ=255) cAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACACTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGa < 5:191336/149‑1 (MQ=255) cAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACACTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGa < 5:186828/149‑1 (MQ=255) tGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGAGcc > 4:98090/1‑149 (MQ=255) cGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGcc < 8:248085/147‑1 (MQ=255) cTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGCCGAAGcc > 1:259285/1‑148 (MQ=255) cTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGCCGAAGcc > 3:181036/1‑148 (MQ=255) tACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGCCGAAGcc > 7:57746/1‑147 (MQ=255) gCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGCCGAAGCCAAg > 3:171942/1‑147 (MQ=255) ccAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGTGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGCCGAAGCCAAGGAGc > 7:126870/1‑149 (MQ=255) ccAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGCCGAAGCCAAGGAGc > 2:273087/1‑149 (MQ=255) gcgcCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGCCGAAGCCAAGGAGCTgg < 4:36948/149‑1 (MQ=255) | GGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAGCAGCGAGGGTGTGGTGACGTTGCGTGGCAAGGTCGACAGTGCCGAAGCCAAGGAGCTGG > NC_002947/142243‑142531 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |