New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	853271 =	42 (0.810)	3 (0.060)	3/252	NT	7.0%	coding (776/1083 nt)	prfA	peptide chain release factor 1
	?	NC_002947	853322 =	40 (0.810)					coding (827/1083 nt)	prfA	peptide chain release factor 1

CTACCGTGCCTCCGGTGCCGGCGGCCAGCACGTCAACAAGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAAC  >  NC_002947/853179‑853470                                                                                                                                                |                                                                                                                                                     ggagcggtcaccggaacccaccagcagcttgcgctcactggcaagggcgttctgcgcggcactggtctgcatgtcgttcagcttggccgacaGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTc                                                                                                                                                   >  1:164287‑M1/93‑147 (MQ=255) ctaccGTGCCTCCGGTGCCGGCGGCCAGCACGTCAACAAGACCGAGTCGGCGATCCGTCTCCCTCACTTGCCCCCCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACATGAACCGTGCTCGCGCCATGGCCTGGCTGTCgg                                                                                                                                                 >  4:82277/1‑149 (MQ=255)   accGTGCCTCCGGTGCCGGCGGCCAGCACGTCAACAAGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGc                                                                                                                                                >  6:27397/1‑148 (MQ=255)     cGTGCCTCCGGTGCCGGCGGCCAGCACGTCAACAAGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCaa                                                                                                                                             <  3:283363/149‑1 (MQ=255)      gTGCCTCCGGTGCCGGCGGCCAGCACGTCAACAAGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAg                                                                                                                                            <  5:293705/149‑1 (MQ=255)           tCCGGTGCCGGCGGCCAGCACGTCAACAAGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGaa                                                                                                                                       >  3:122455/1‑149 (MQ=255)             cGGTGCCGGCGGCCAGCACGTCAACAAGACCGATTCGGCGATCCGAATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGaa                                                                                                                                       <  6:39393/147‑1 (MQ=255)               gTGCCGGCGGCCAGCACGTCAACAAGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGAc                                                                                                                                   <  4:122455/149‑1 (MQ=255)                           aGCACGTCAACAAGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGt                                                                                                                       >  3:40069/1‑149 (MQ=255)                                gTCAACAAGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCcgc                                                                                                                  >  5:293828/1‑149 (MQ=255)                                  caacaaGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCcgcg                                                                                                                 >  7:133062/1‑148 (MQ=255)                                      aaGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGTTTTTCCCGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGaa                                                                                                            <  1:108856/149‑1 (MQ=255)                                             aTTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCtt                                                                                                     >  4:226636/1‑149 (MQ=255)                                             aTTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCtt                                                                                                     <  8:50324/149‑1 (MQ=255)                                                   cGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGt                                                                                               <  6:293828/149‑1 (MQ=255)                                                            tcactcacTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAg                                                                                      >  1:81720/1‑149 (MQ=255)                                                              actcactTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAgct                                                                                    >  5:236737/1‑149 (MQ=255)                                                              actcactTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAgc                                                                                     <  5:218439/148‑1 (MQ=255)                                                                tcactTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAgctgc                                                                                  >  7:209087/1‑149 (MQ=255)                                                                tcactTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAgctgc                                                                                  >  2:102854/1‑149 (MQ=255)                                                                  actTGCCCACCTGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTGCTGGCTGTCGTCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGctgctg                                                                                <  5:242050/149‑1 (MQ=255)                                                                  actTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAgctgct                                                                                 <  5:27397/148‑1 (MQ=255)                                                                  actTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGctgctg                                                                                >  6:295621/1‑149 (MQ=255)                                                                    ttGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCACACCGCACATGCCAGTGAGCGCAAGCTGCtggt                                                                              >  4:237635/1‑149 (MQ=255)                                                                      gCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCtggtg                                                                             <  6:236737/148‑1 (MQ=255)                                                                           ccGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTcc                                                                       <  3:226636/149‑1 (MQ=255)                                                                            cGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGc                                                                                                   >  5:206819/1‑120 (MQ=255)                                                                            cGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGc                                                                                                   <  6:206819/120‑1 (MQ=255)                                                                            cGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCg                                                                      <  8:226903/149‑1 (MQ=255)                                                                            cGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCg                                                                      >  1:222442/1‑149 (MQ=255)                                                                                    tGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGAAGAACGCCCATGCCAGTGAGCGCAAGCTGCTGCTGCGTTCCGGTGACCg                                                               >  6:264820/1‑148 (MQ=255)                                                                                         gacagccaggacatggcgcgagcacggttcttgtgctgcgagcgctcctcctggcTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTcc                                                           >  1:164287‑M2/56‑147 (MQ=255)                                                                                         gAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGa                                                         <  8:133062/149‑1 (MQ=255)                                                                                           aTGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAgc                                                       <  2:222442/149‑1 (MQ=255)                                                                                             GCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAgcg                                                      <  2:314265‑M1/148‑1 (MQ=255)                                                                                              ccaggacatggcgcgagcacggttcttgtgctgcgagcgctcctcctggcTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAgc                                                                                           <  4:261929‑M2/60‑1 (MQ=255)                                                                                              ccaggacatggcgcgagcacggttcttgtgctgcgagcgctcctcctggcTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAgc                                                                                           >  3:261929‑M2/51‑110 (MQ=255)                                                                                                                     aGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAg                             <  1:96433/149‑1 (MQ=255)                                                                                                                       aaCCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAggg                           >  1:145524/1‑149 (MQ=255)                                                                                                                           gTGCTCGCGCGATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGTGGCgg                       <  5:264820/149‑1 (MQ=255)                                                                                                                           gTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCgg                       <  1:73928/149‑1 (MQ=255)                                                                                                                           gTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCgg                       <  3:82277/149‑1 (MQ=255)                                                                                                                              cTCGCGCCATGTCCTTGCTGTCGGCCAAGCTTAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGt                     <  1:219916/148‑1 (MQ=255)                                                                                                                               tCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCGTTGCCAGTGAGCGCAAGCTGCTGGTggg                                                                           <  1:183897/93‑1 (MQ=255)                                                                                                                               tCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTggg                                                                           >  2:183897/1‑93 (MQ=255)                                                                                                                                         tcctggcTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCg         >  3:52516‑M2/8‑149 (MQ=255)                                                                                                                                                tGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAAc  <  3:237635/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                     CTACCGTGCCTCCGGTGCCGGCGGCCAGCACGTCAACAAGACCGATTCGGCGATCCGTATCACTCACTTGCCCACCGGTATCGTGGTCGAATGCCAGGAGGAGCGCTCGCAGCACAAGAACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAAC  >  NC_002947/853179‑853470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.