New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1591654	58 (1.110)	3 (0.060)	3/256	NT	5.2%	coding (240/921 nt)	PP_1395	AraC family transcriptional regulator
	?	NC_002947	= 1591667	53 (1.060)					coding (227/921 nt)	PP_1395	AraC family transcriptional regulator

GGCGATCAGTTGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGATGCTGGACCAAAGGGCTCGC  >  NC_002947/1591528‑1591814                                                                                                                                             |                                                                                                                                                     ggCGATCAGTTGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTc                                                                                                                                               <  8:196893/147‑1 (MQ=255) ggCGATCAGTTGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGt                                                                                                                                             >  5:272228/1‑149 (MQ=255)  gCGATCAGTTGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTc                                                                                                                                            <  4:125454/149‑1 (MQ=255)   cGATCAGTTGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCa                                                                                                                                           >  6:301950/1‑149 (MQ=255)   cGATCAGTTGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCa                                                                                                                                           >  4:68481/1‑149 (MQ=255)    gATCAGTTGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCAc                                                                                                                                          >  2:270400/1‑149 (MQ=255)         gTTGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAg                                                                                                                                      >  7:259318/1‑148 (MQ=255)          ttGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAgg                                                                                                                                     >  2:103774/1‑148 (MQ=255)               tGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAgg                                                                                                                               >  6:148211/1‑149 (MQ=255)               tGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAgg                                                                                                                               >  1:75185/1‑149 (MQ=255)                 aTCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGGCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGc                                                                                                                              <  5:225255/148‑1 (MQ=255)                  tctcCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCtt                                                                                                                            >  4:130092/1‑149 (MQ=255)                  tctcCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCtt                                                                                                                            >  5:165213/1‑149 (MQ=255)                    tcCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTa                                                                                                                                                     >  3:202412‑M2/1‑121 (MQ=255)                    tcCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTa                                                                                                                                                     <  4:202412‑M2/122‑2 (MQ=255)                      cgccgGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGCACAGGCttt                                                                                                                           <  4:90371/146‑1 (MQ=255)                       gccgGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTtgct                                                                                                                       >  3:228465/1‑149 (MQ=255)                        ccgGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTtgctg                                                                                                                      >  5:27912/1‑149 (MQ=255)                          gggTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGcc                                                                                                                    <  3:87909/149‑1 (MQ=255)                           ggtccaggtccaTGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGccc                                                                                                                   <  4:143966/149‑1 (MQ=255)                                 ggtccaTGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGc                                                                                                              >  5:73423/1‑148 (MQ=255)                                  gtccaTGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCaa                                                                                                            <  5:170573/149‑1 (MQ=255)                                  gtccaTGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCaa                                                                                                            <  8:259318/149‑1 (MQ=255)                                       tGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATg                                                                                                       <  6:272228/149‑1 (MQ=255)                                            aGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑Ag                                                                                                 <  8:291684/149‑1 (MQ=255)                                            aGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑Ag                                                                                                 <  1:270400/149‑1 (MQ=255)                                                ccAGGCTTGGGTTCTCGGGGCTGGCATGCCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑Aggg                                                                                               >  1:174894/1‑148 (MQ=255)                                                ccAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCa                                                                                             <  6:165213/149‑1 (MQ=255)                                                         ggTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTgcgc                                                                                     >  1:280224/1‑148 (MQ=255)                                                                ggggCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAgggt                                                                               <  3:298102/147‑1 (MQ=255)                                                                ggggCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAggg                                                                                <  3:130092/146‑1 (MQ=255)                                                                 gggCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAgggtggg                                                                            <  6:291491/149‑1 (MQ=255)                                                                    cTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTAc                                                                         <  6:40401/149‑1 (MQ=255)                                                                             cAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGt                                                                  >  6:234151/1‑148 (MQ=255)                                                                              aGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTAc                                                                <  2:280224/149‑1 (MQ=255)                                                                               gCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACa                                                               <  5:301950/149‑1 (MQ=255)                                                                                    aCGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTc                                                          >  2:92759/1‑149 (MQ=255)                                                                                    aCGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTc                                                          <  1:258730/149‑1 (MQ=255)                                                                                     cGGCGATGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCg                                                         <  4:228465/149‑1 (MQ=255)                                                                                             aGTTGCAATGTCACCTAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTaa                                                   <  6:73423/147‑1 (MQ=255)                                                                                                 gCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCAcc                                             <  6:27912/149‑1 (MQ=255)                                                                                                   aaGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAg                                           <  5:234151/149‑1 (MQ=255)                                                                                                     ggTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGt                                         <  1:308345/149‑1 (MQ=255)                                                                                                       tCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTAc                                       <  5:148211/149‑1 (MQ=255)                                                                                                         aCCGAAACGACCATGTAATGCAGTGGGTGGTTTGCGTACTGCTCGTCACCCAGGATCAGGCTTTTTCTGCCCTTGGCTATGATTCACTAGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTAc                                       <  1:92759/148‑1 (MQ=255)                                                                                                         aCCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTa                                                                 <  6:184048/121‑1 (MQ=255)                                                                                                         aCCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTa                                                                 >  5:184048/1‑121 (MQ=255)                                                                                                         aCCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAg                                     <  4:36572/149‑1 (MQ=255)                                                                                                         aCCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAg                                     >  6:199908/1‑149 (MQ=255)                                                                                                          ccGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGCAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAgg                                    >  8:284054/1‑149 (MQ=255)                                                                                                           cGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTactgcattacatggtcgtttcggtgaccttgccactcagcgccgtgaggctggatgccagccccgagaacccaagcctgggcctgcgcatggacctggacccggcggagatcag                                    <  1:55386‑M2/149‑115 (MQ=255)                                                                                                           cGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGt                                   >  2:153526/1‑149 (MQ=255)                                                                                                                 gACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGACCAGGCTTTTGCTGCCCTGGGCAAGGATCCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCCCCAGGTACAGGTCAACGa                             >  3:58944/1‑149 (MQ=255)                                                                                                                  aCCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGAt                            >  1:31631/1‑149 (MQ=255)                                                                                                                       gTAATGCAGTGGGTCGTAGGCGTactgcattacatggtcgtttcggtgaccttgccactcagcgccgtgaggctggatgccagccccgagaacccaa                                                                            >  5:158987‑M2/1‑23 (MQ=255)                                                                                                                       gTAATGCAGTGGGTCGTAGGCGTactgcattacatggtcgtttcggtgaccttgccactcagcgccgtgaggctggatgccagccccgagaacccaa                                                                            <  6:158987‑M2/97‑75 (MQ=255)                                                                                                                         aaTGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGAt                     >  1:214617/1‑149 (MQ=255)                                                                                                                              aGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGATGCTg                 >  4:8238/1‑148 (MQ=255)                                                                                                                                        aGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCAt                                <  2:149599/123‑1 (MQ=255)                                                                                                                                        aGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCAt                                >  1:149599/1‑123 (MQ=255)                                                                                                                                        aGGCGTACTGCTCGTAACCCAGGAACAGGATTTTGCTCCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTACGGTGTAACGCACAAGGTACAGGACATCGATCGCCGATGCTGGACCAAAgcg       >  8:209754/1‑146 (MQ=255)                                                                                                                                          gCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGATGCTGGACCAAAGGGCTc    <  7:284054/149‑1 (MQ=255)                                                                                                                                            gTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGATGCTGGACCAAAGGGCTCGc  >  5:194516/1‑149 (MQ=255)                                                                                                                                             |                                                                                                                                                     GGCGATCAGTTGGCTGATCTCCGCCGGGTCCAGGTCCATGCGCAGGCCCAGGCTTGGGTTCTCGGGGCTGGCAT‑CCAGCCTCACGGCGCTGAGTGGCAAGGTCACCGAAACGACCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCAC‑AGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGATGCTGGACCAAAGGGCTCGC  >  NC_002947/1591528‑1591814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.