New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1806763 =	43 (0.830)	3 (0.060)	3/254	NT	7.3%	coding (446/1629 nt)	pyrG	CTP synthase
	?	NC_002947	1806797 =	35 (0.700)					coding (480/1629 nt)	pyrG	CTP synthase

CATCCAGGTCATCCCGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTCCATCGGCCTGCAGCCTGACGTGCTGATCTGC  >  NC_002947/1806650‑1806944                                                                                                                                                    |                                                                                                                                                    gcagctccttgaccgagtgcttggtctgcttggtctttgtttcgccagcggtggcgatgtacgggaccagggtcatgttaatcagcatgtcacgcttggagcccacttctacaCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCgtg                                                                                                                                                    >  6:304242‑M1/114‑149 (MQ=255)   tCCAGGTCATCCCGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGCCGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTc                                                                                                                                                  >  7:68658/1‑149 (MQ=255)   tCCAGGTCATCCCGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTc                                                                                                                                                  >  4:124041/1‑149 (MQ=255)      aGGTCATCCCGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCg                                                                                                                                                 >  2:15779/1‑147 (MQ=255)      aGGTCATCCCGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCg                                                                                                                                                 >  6:272821/1‑147 (MQ=255)         tCATCCCGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTg                                                                                                                                            >  3:212304/1‑149 (MQ=255)             ccgagtgctgggtcggcttggtcttggtttcgccagcggtggcgatgtacgggaccagggtcaggtgcatcagcatggcacgcttggagcccacttcgacaCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGaa                                                                                                                                               <  8:138820‑M1/41‑1 (MQ=255)             ccgagtgctgggtcggcttggtcttggtttcgccagcggtggcgatgtacgggaccagggtcaggtgcatcagcatggcacgcttggagcccacttcgacaCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGaa                                                                                                                                               >  7:138820‑M1/102‑142 (MQ=255)             cccGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCt                                                                                                                                        >  3:189116/1‑149 (MQ=255)               cGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTc                                                                                                                                       >  2:291424/1‑148 (MQ=255)                 cacaTCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCaa                                                                                                                                    <  1:179157/149‑1 (MQ=255)                     tCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGt                                                                                                                                <  3:229341/149‑1 (MQ=255)                                    aGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCAc                                                                                                                 <  7:213191/149‑1 (MQ=255)                                     gCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTTCAAGCGTGCCATGCTGATGCAcc                                                                                                                <  2:170660/149‑1 (MQ=255)                                     gCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCAcc                                                                                                                >  7:193002/1‑149 (MQ=255)                                                tcaAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTc                                                                                                     >  6:196032/1‑149 (MQ=255)                                                tcaAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGAGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCCCCTGACCCTGGTc                                                                                                     >  5:198080/1‑149 (MQ=255)                                                  aaGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTccc                                                                                                   <  1:291424/149‑1 (MQ=255)                                                    gggTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCg                                                                                                  >  1:307423/1‑148 (MQ=255)                                                    gggTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGt                                                                                                 <  8:193002/149‑1 (MQ=255)                                                        gCCGGCGCTGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGTGTGATATCTAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTTCCATGCTGATGCACCTGACCCTGGTCCCGTACAt                                                                                             <  6:198080/149‑1 (MQ=255)                                                         ccGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATc                                                                                            >  2:79910/1‑149 (MQ=255)                                                             cGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCa                                                                                        <  2:6980/149‑1 (MQ=255)                                                                     aCGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGc                                                                                <  5:272821/149‑1 (MQ=255)                                                                     aCGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGc                                                                                <  4:189116/149‑1 (MQ=255)                                                                          gCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAac                                                                           >  3:48691/1‑149 (MQ=255)                                                                          gCCCTGGTGGAGATCGGCGGTAACGTGGGTGATATAGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGCAac                                                                           >  2:40672/1‑149 (MQ=255)                                                                           cccTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAacc                                                                          <  1:216192/149‑1 (MQ=255)                                                                            ccTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAacc                                                                          >  2:250978/1‑148 (MQ=255)                                                                             cTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAaccaa                                                                        <  5:196032/149‑1 (MQ=255)                                                                                gtggAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAaccaag                                                                       <  2:272396/147‑1 (MQ=255)                                                                                 tggAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAaccaagac                                                                     >  2:100255/1‑148 (MQ=255)                                                                                 tggAGATCGGCGGTACAGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAaccaagac                                                                     >  1:148109/1‑148 (MQ=255)                                                                                    agaTCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAaccaagaccaag                                                                 <  4:48691/149‑1 (MQ=255)                                                                                         ggcggTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGa                                                             <  1:15779/148‑1 (MQ=255)                                                                                                       tGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTc                                               >  1:86365/1‑148 (MQ=255)                                                                                                          tatCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAg                                            <  1:250978/148‑1 (MQ=255)                                                                                                           ttcgacacgcagctggcgaatcgcctcgaggaacggctgcgTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCgg                                                 >  7:138820‑M2/42‑142 (MQ=255)                                                                                                           ttcgacacgcagctggcgaatcgcctcgaggaacggctgcgTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCgg                                                 <  8:138820‑M2/101‑1 (MQ=255)                                                                                                              gAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCt                                       >  2:220750/1‑149 (MQ=255)                                                                                                                cacgcagctggcgaatcgcctcgaggaacggctgcgTGTAGAAGTGGGCTCCAAGCGTGACATGCTGATTAACATGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACAAAGACCAAGCAGACCAAGCACTCGGTCAAGGAGCTgc                                     >  6:304242‑M2/37‑149 (MQ=255)                                                                                                                   GCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTgcgc                                   >  4:212304‑M1/1‑148 (MQ=255)                                                                                                                   GCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCt                                  <  6:199026‑M1/149‑1 (MQ=255)                                                                                                                   GCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCt                                  <  1:293132‑M1/149‑1 (MQ=255)                                                                                                                    CAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTc                                 >  2:307423‑M1/1‑149 (MQ=255)                                                                                                                     AGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTc                                 <  3:29346‑M1/148‑1 (MQ=255)                                                                                                                         gTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTCCATCg                            <  3:124041/149‑1 (MQ=255)                                                                                                                             cTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTCCATCGGCCt                        >  2:91827/1‑149 (MQ=255)                                                                                                                              tCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTCCATCGGCCTg                       >  6:95209/1‑149 (MQ=255)                                                                                                                                   gCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTCCATCGGCCTGCAGc                   >  2:326947/1‑148 (MQ=255)                                                                                                                                           ccAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTCCATCGGCCTGCAGCCTGACGTGc          <  1:100255/149‑1 (MQ=255)                                                                                                                                             aGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTCCATCGGCCTGCAGCCTGACGTGCTg        <  2:148109/149‑1 (MQ=255)                                                                                                                                                   gTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTCCATCGGCCTGCAGCCTGACGTGCTGATCTGc  >  1:26236‑M2/2‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CATCCAGGTCATCCCGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGATGCCGACGTGGCCCTGGTGGAGATCGGCGGTACCGTGGGTGATATCGAGTCGCAGCCGTTCCTCGAGGCGATTCGCCAGCTGCGTGTCGAAGTGGGCTCCAAGCGTGCCATGCTGATGCACCTGACCCTGGTCCCGTACATCGCCACCGCTGGCGAAACCAAGACCAAGCCGACCCAGCACTCGGTCAAGGAGCTGCGCTCCATCGGCCTGCAGCCTGACGTGCTGATCTGC  >  NC_002947/1806650‑1806944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.