New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2014482	34 (0.650)	3 (0.060)	3/254	NT	8.6%	coding (1006/1443 nt)	PP_1794	hypothetical protein
	?	NC_002947	= 2014522	31 (0.620)					coding (966/1443 nt)	PP_1794	hypothetical protein

ACGAAGGTACCGTTCGACGCATCCAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGACATAACCAGTGAAGAACTTGGCGCCTTCCTGGTCTACGTCGCGGT  >  NC_002947/2014376‑2014670                                                                                                                                                   |                                                                                                                                                      aCGAAGGTACCGTTCGACGCATCCAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGgc                                                                                                                                                     <  2:149494‑M2/149‑3 (MQ=255) aCGAAGGTACCGTTCGACGCATCCAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGgc                                                                                                                                                     <  2:256674‑M2/149‑3 (MQ=255)  cGAAGGTACCGTTCGACGCATCCAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGgcc                                                                                                                                                    <  7:47054‑M2/149‑4 (MQ=255)    aaGGTACCGTTCGACGCATCCAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGgcctg                                                                                                                                                  >  2:9544‑M2/1‑144 (MQ=255)           cGTTCGACGCATCCAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGGGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAgg                                                                                                                                           <  8:47054/149‑1 (MQ=255)           cGTTCGACGCATCCAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAgg                                                                                                                                           <  6:300750/149‑1 (MQ=255)               cGACGCATCCAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGt                                                                                                                                      >  3:51198/1‑149 (MQ=255)                        cAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGCCaa                                                                                                                             >  6:151729/1‑148 (MQ=255)                             ccTGAGCTTCGGGCGAAACCGAGATGGCAGCAGCTACGTCAGCCTGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGGCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGc                                                                                                                         <  1:294398/148‑1 (MQ=255)                                  gCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCgttgtt                                                                                                                   <  7:87012/149‑1 (MQ=255)                                  gCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCgttgt                                                                                                                    >  7:293166/1‑148 (MQ=255)                                   cTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTa                                                                                                                  <  1:81642/149‑1 (MQ=255)                                   cTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGCCAATGACgttaacg                                                                                                                  <  5:151729/149‑5 (MQ=255)                                      cGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAac                                                                                                                <  3:258397/148‑1 (MQ=255)                                              aCCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGACATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGaa                                                                                                       >  1:159302/1‑149 (MQ=255)                                                cGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCCCCAGCACCGCCACCCAGCAGGGCCGGGTACAGGT‑CGTTAACGTAATTGGCGTTGTTTACACCCGCGAACt                                                                                                     >  2:278216/1‑149 (MQ=255)                                                     tGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGAc                                                                                                <  7:1404/149‑1 (MQ=255)                                                     tGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGAc                                                                                                <  4:51198/149‑1 (MQ=255)                                                        cagcagCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGaa                                                                                             <  6:122171/149‑1 (MQ=255)                                                                        cAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTgg                                                                             <  1:149494/149‑1 (MQ=255)                                                                         aGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTgg                                                                             >  3:282857/1‑148 (MQ=255)                                                                         aGGCTACCGCCGTTGGCCAGCAGGGCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGTCCCTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTgg                                                                             <  1:256674/149‑1 (MQ=255)                                                                            cggtagccgTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAAc                                                                         >  5:155181/6‑149 (MQ=255)                                                                                cgccgTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCg                                                                     >  3:258714/1‑149 (MQ=255)                                                                                               ggtcggtcCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGAGACCCAGCAGGGCCTGGTACACGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGCGGATTGGCAACGTCGGTCAGCTAACCACCg                                                      >  7:108199/1‑149 (MQ=255)                                                                                                    gtcCAGGCGCTTGAAGCGGCGTCATCAGCACCACCGCGACGCAGCAGGGCCTGGTACAGGG‑CGTTAACGTCAATGGCGTTGTTAACACCCGCTAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCgttgtt                                                 <  8:293166/149‑1 (MQ=255)                                                                                                    gtcCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGgcctggaccgacctgctggccaacggcggtagcctggctgacgtagctgctgccatctcggtttcggccgaagctcaggcact                                                                    >  3:176978‑M2/1‑48 (MQ=255)                                                                                                    gtcCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGgcctggaccgacctgctggccaacggcggtagcctggctgacgtagctgctgccatctcggtttcggccgaagctcaggcact                                                                    <  4:176978‑M2/131‑84 (MQ=255)                                                                                                     tcCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGgcctggaccgacctgctggccaacggcggtagcctggctgacgtagctgctgccatctcggtttcggccgaagctcaggcactggatgcgtcgaacagtacc                                                 <  5:247602‑M2/149‑103 (MQ=255)                                                                                                     tcCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCgttgtt                                                 >  5:14359/1‑148 (MQ=255)                                                                                                       cAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGa                                               >  2:26121/1‑148 (MQ=255)                                                                                                                gAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGACATAACCAGt                                     <  6:155181/149‑1 (MQ=255)                                                                                                                      gcgTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGACATAACCAGTgaagaa                               >  8:229347/1‑149 (MQ=255)                                                                                                                                   caCCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGACATAACCAGTGAAGAACTTGGCGCCTTcc                  >  3:301867/1‑149 (MQ=255)                                                                                                                                     ccGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGACATAACCAGTGAAGAACTTGGCGCCTTCCTg                >  6:291340/1‑149 (MQ=255)                                                                                                                                          aCCCAGCAGGGCCTGGTACAGGT‑CGTTATCGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCAGTCAGCGAACCTCCGTTGTTGACATAACCAGTGAAGAACTTGGCGCCTTCCTGGTCTa           <  1:278216/149‑1 (MQ=255)                                                                                                                                            ccAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGACATAACCAGTGAAGAACTTGGCACCTTCCTGGTCTACg         <  7:229347/149‑1 (MQ=255)                                                                                                                                            caagcagGTCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGACATAACCAGTGAAGAACTTGGCGCCTTCCTGGTCTACg         >  2:199630/3‑149 (MQ=255)                                                                                                                                                   ggCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGACATAACCAGTGAAGAACTTGGCGCCTTCCTGGTCTACGTCGCGGt  >  1:176913/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                      ACGAAGGTACCGTTCGACGCATCCAGTGCCTGAGCTTCGGCCGAAACCGAGATGGCAGCAGCTACGTCAGCCAGGCTACCGCCGTTGGCCAGCAGGTCGGTCCAGGCGCTGGAAGCGGCGTCATCAGCAGCACCGCGACCCAGCAGGGCCTGGTACAGGT‑CGTTAACGTCATTGGCGTTGTTAACACCCGCGAACTCGGACGAATCCAGCAGGGCATTGGCAACGTCGGTCAGCGAACCACCGTTGTTGACATAACCAGTGAAGAACTTGGCGCCTTCCTGGTCTACGTCGCGGT  >  NC_002947/2014376‑2014670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.