New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2505333	32 (0.610)	4 (0.080)	4/252	NT	10.6%	coding (1120/1146 nt)	yliI	aldose sugar dehydrogenase
	?	NC_002947	= 2505360	37 (0.750)					intergenic (+1/‑41)	yliI/PP_2199	aldose sugar dehydrogenase/hypothetical protein

GATGGCGACAAGGTGGTGCACGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCA  >  NC_002947/2505213‑2505507                                                                                                                                                    |                                                                                                                                                     gATGGCGACAAGGTGGTGCACGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGAc                                                                                                                                                      <  5:8480/148‑1 (MQ=255)                   cACGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGGCTGACGCGCG‑CCTGCACCGAGGGt                                                                                                                                  >  8:82535/1‑149 (MQ=255)                     cGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGa                                                                                                                                <  5:284289/149‑1 (MQ=255)                      gAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGa                                                                                                                                >  1:106896/1‑148 (MQ=255)                           gCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCg                                                                                                                          <  3:102297/149‑1 (MQ=255)                                     ggTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAAt                                                                                                                  <  1:296547/147‑1 (MQ=255)                                         aCCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGc                                                                                                             <  1:48567/149‑1 (MQ=255)                                           cTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTc                                                                                                                           <  4:116986/132‑1 (MQ=255)                                           cTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTc                                                                                                                           >  3:116986/1‑132 (MQ=255)                                           cTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATg                                                                                                          >  2:176347/1‑149 (MQ=255)                                              aaGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATgg                                                                                                         <  2:148620/147‑1 (MQ=255)                                                  cgcgTATCCGTAATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCg                                                                                                   <  6:215815/149‑1 (MQ=255)                                                        tCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCt                                                                                                                                             >  4:40473/1‑101 (MQ=255)                                                                 tgCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCctc                                                                                     <  8:20592/148‑1 (MQ=255)                                                                    gggTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTAcc                                                                                 <  5:110350/149‑1 (MQ=255)                                                                                   gTTACATGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCa                                                                  >  5:224027/1‑149 (MQ=255)                                                                                        cTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCgg                                                             <  7:67161/149‑1 (MQ=255)                                                                                          gtatgtaCTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCt                                                                       <  1:155235/137‑1 (MQ=255)                                                                                          gtatgtaCTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCt                                                                       >  2:155235/1‑137 (MQ=255)                                                                                           tatgtaCTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGc                                                          >  1:180814/1‑149 (MQ=255)                                                                                                    aCCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGa                                                                     >  8:215890/1‑129 (MQ=255)                                                                                                    aCCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGa                                                                     <  7:215890/129‑1 (MQ=255)                                                                                                    aCCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTg                                                   <  8:166036/147‑1 (MQ=255)                                                                                                         tGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGAccc                                            >  8:71701/1‑149 (MQ=255)                                                                                                         tGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGAccc                                            >  2:188513/1‑149 (MQ=255)                                                                                                            cAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTCCCAGCAAGCCCTGAGCCCTCGGGGGTACGTTGCTGACCGTGc                                         >  8:229698/1‑149 (MQ=255)                                                                                                             aaGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACgcgcgccatccttgtcatcggtcagtacatacaggtaaccatctggccccacccgcacatcacggatacgcgccttcaggtcaccgagcaaccgctcttcgtgcaccac                                         <  4:306510‑M2/149‑110 (MQ=255)                                                                                                             aaGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAAt                                                                                                                  <  8:140222/75‑1 (MQ=255)                                                                                                               ggATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACgcgcgccatccttgtcatcggtcagtacatacaggtaaccatctggccccacccgcacatcacggatacgcgccttcaggtcaccgagcaaccgctcttcgtgccccacct                                       <  7:9459‑M2/149‑112 (MQ=255)                                                                                                                    gcgcgcTACTCAAGGTCGGCCTGGCCGACTGACgcgcgccatccttgtcatcggtcagtacatacaggtaaccatctggccccacccgcacatcacggatacgcgccttcaggtcaccgagcaaccgctcttcgtgcaccaccttgtcg                                  <  4:318021‑M2/149‑117 (MQ=255)                                                                                                                     cgcgcTACTCAAGTTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGATGGTGACAGTCGGGTAGAATGCg                                                                                                               <  1:219162/70‑1 (MQ=255)                                                                                                                     cgcgcTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCg                                                                                                               >  2:219162/1‑70 (MQ=255)                                                                                                                      gcgcTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCcgc                               >  7:178422/1‑149 (MQ=255)                                                                                                                      gagcTACTCAAGGTCGGCCTGGCCGACTGACGAGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAACCACTCTTCCAGCAAGCCCAGCGCCCTCGCGGGTACGTTGCTGCCCCTGACAAGGCCagc                               >  1:307750/3‑149 (MQ=255)                                                                                                                           aCTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTTGATTGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGAc                                              <  1:98592/129‑1 (MQ=255)                                                                                                                           aCTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGCCCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGCCCCTGCCCAGGCCCGcgtcgt                          >  8:131381/1‑149 (MQ=255)                                                                                                                           aCTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGAc                                              >  2:98592/1‑129 (MQ=255)                                                                                                                             tCAAGGTCGGCATGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCgtcgtc                         >  4:140014/1‑148 (MQ=255)                                                                                                                              cAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCgtcgtc                         >  1:307436/1‑147 (MQ=255)                                                                                                                              cAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCgtcgtc                         >  5:249811/1‑147 (MQ=255)                                                                                                                               aaGGTCGGCCTGGCCGACTGACgcgcgccatccttgtcatcggtcagtacatacaggtaaccatctggccccacccgcacatcacggatacgcgccttcaggtcaccgagcaaccgctcttcgtgcaccaccttgtcgccatccagtt                        >  3:318021‑M2/1‑22 (MQ=255)                                                                                                                                    cGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCtt                 >  2:263557/1‑149 (MQ=255)                                                                                                                                       ccTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGc               >  7:291943/1‑148 (MQ=255)                                                                                                                                                 tGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTc    >  6:253484/1‑149 (MQ=255)                                                                                                                                                 tGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTc    <  7:71701/149‑1 (MQ=255)                                                                                                                                                   aCGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTc    >  8:191897/1‑147 (MQ=255)                                                                                                                                                   aCGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTc    >  4:290638/1‑147 (MQ=255)                                                                                                                                                   aCGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCa  <  2:106896/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GATGGCGACAAGGTGGTGCACGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCG‑CCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCA  >  NC_002947/2505213‑2505507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.