New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4337139	52 (1.000)	4 (0.080)	4/252	NT	7.5%	coding (76/885 nt)	PP_3811	LysR family transcriptional regulator
	?	NC_002947	= 4337178	50 (1.010)					coding (37/885 nt)	PP_3811	LysR family transcriptional regulator

CCAGTGGCGTGGCATCGAGGCGCCGGGTGGAGCGGTTGAGCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGATGGCCCCAAAGGCCAGGCAAGACGCC  >  NC_002947/4337031‑4337326                                                                                                                                                    |                                                                                                                                                     ccAGTGGCGTGGCATCGAGGCGCCGGGTGGAGCGGTTGAGCAGGCGCACGCCCAGGCGCTCCGCAAGCTGCATCAGGCGCCGACTGACCGATTGGTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAACCTCCCTGCCTCCAGCACc                                                                                                                                                     <  2:62623‑M2/149‑2 (MQ=255)   aGTGGCGTGGCATCGAGGCGCCGGGTGGAGCGGTTGAGCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACctg                                                                                                                                                   >  6:46791‑M2/1‑146 (MQ=255)     tggcgtggcATCGAGGCGCCGGGTGGAGCGGTTGAGCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACctggg                                                                                                                                                 >  1:42176‑M2/1‑144 (MQ=255)     tggcgtggcATCGAGGCGCCGGGGGGAGCGGTTGAGCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACctggg                                                                                                                                                 >  8:117348‑M2/1‑144 (MQ=255)        cgtggcATCGAGGCGCCGGGTGGAGCGGTTGAGCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCaa                                                                                                                                              <  2:37218/149‑1 (MQ=255)              aTCGAGGCGCCGGGTGGAGCGGTTGAGCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATcc                                                                                                                                        >  7:54840/1‑149 (MQ=255)                 gAGGCGCCGGGTGGAGCGGTTGAGCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCa                                                                                                                                     >  4:134457/1‑149 (MQ=255)                                    ttGAGCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCAt                                                                                                                  >  1:18155/1‑149 (MQ=255)                                        gCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTc                                                                                                              >  5:41330/1‑149 (MQ=255)                                        gCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTc                                                                                                              <  6:41330/149‑1 (MQ=255)                                            gcgcACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGc                                                                                                          >  3:144408/1‑149 (MQ=255)                                            gcgcACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGc                                                                                                          >  6:31067/1‑149 (MQ=255)                                              gcACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTc                                                                                                                              >  8:15523/1‑127 (MQ=255)                                              gcACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTc                                                                                                                              <  7:15523/127‑1 (MQ=255)                                              gcACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGctc                                                                                                        >  7:181574/1‑149 (MQ=255)                                                aCGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTa                                                                                                      <  4:144408/149‑1 (MQ=255)                                                    ccAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCt                                                                                                   >  5:184142/1‑148 (MQ=255)                                                    ccAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCt                                                                                                   >  8:134951/1‑148 (MQ=255)                                                      aGGCGCTCCTCAAGCTGCATCAGGCGCCGAGTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGAc                                                                                                <  6:18489/149‑1 (MQ=255)                                                          gcTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTaa                                                                                                                          <  4:180991/119‑1 (MQ=255)                                                          gcTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCAGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTaa                                                                                                                          >  3:180991/1‑119 (MQ=255)                                                              ctcAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATTACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCaaa                                                                                         >  8:263957/1‑148 (MQ=255)                                                              ctcAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCaaa                                                                                         >  5:171410/1‑148 (MQ=255)                                                                 aaGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACt                                                                                     >  2:181963/1‑149 (MQ=255)                                                                  aGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACtt                                                                                    >  5:145922/1‑149 (MQ=255)                                                                   gCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCaaa                                                                                                                                             >  1:238148/1‑91 (MQ=255)                                                                   gCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCaaa                                                                                                                                             <  2:238148/91‑1 (MQ=255)                                                                   gCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGCTCCGCGTGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACtt                                                                                    >  6:81506/1‑148 (MQ=255)                                                                       cATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAg                                                                               <  6:184142/149‑1 (MQ=255)                                                                                         cGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTGTAGCTGACAGTCAAACTCTTTATAGCGGCGTTTTCCCACAAGt                                                             >  6:17042/1‑149 (MQ=255)                                                                                           aTTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCGAACACTTTATAGCGGCTTTTTCCCACAAGTGc                                                           <  2:18155/149‑1 (MQ=255)                                                                                            ttGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCa                                                          <  5:31067/149‑1 (MQ=255)                                                                                              gCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCAt                                                         <  3:151412/148‑1 (MQ=255)                                                                                               cTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATc                                                        <  8:54840/148‑1 (MQ=255)                                                                                               cTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATc                                                        <  4:284511/148‑1 (MQ=255)                                                                                                ttGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGc                                                                                                          <  3:32465/97‑1 (MQ=255)                                                                                                ttGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGc                                                                                                          >  4:32465/1‑97 (MQ=255)                                                                                                ttGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGc                                                                           >  8:195149/1‑128 (MQ=255)                                                                                                ttGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGc                                                                           <  7:195149/128‑1 (MQ=255)                                                                                                  ggACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACctgggcatgtccaagcaatcggtcagtcggcgcctgatgcagcttgaggagcgcctgggcgtgcgcctgctc                                                                              <  6:109014‑M2/123‑73 (MQ=255)                                                                                                  ggACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACctgggcatgtccaagcaatcggtcagtcggcgcctgatgcagcttgaggagcgcctgggcgtgcgcctgctc                                                                              >  5:109014‑M2/1‑51 (MQ=255)                                                                                                  ggACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGc                                                     <  6:1821/148‑1 (MQ=255)                                                                                                      aTGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACctgggcatgtccaagcaatcggtcagtcggcgcctgatgcagcttgaggagcgcctgggcgtgcgcctgctcaaccgctccacccgg                                                               <  6:165455‑M2/134‑88 (MQ=255)                                                                                                      aTGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACctgggcatgtccaagcaatcggtcagtcggcgcctgatgcagcttgaggagcgcctgggcgtgcgcctgctcaaccgctccacccgg                                                               >  5:165455‑M2/1‑47 (MQ=255)                                                                                                      aTGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACa                                                                                               >  4:62840/1‑102 (MQ=255)                                                                                                        gCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATc                                               >  7:242698/1‑148 (MQ=255)                                                                                                          ccAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTAc                                            >  4:164478/1‑149 (MQ=255)                                                                                                           cAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGc                                                     >  6:118086/1‑139 (MQ=255)                                                                                                           cAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGc                                                     <  5:118086/139‑1 (MQ=255)                                                                                                                ggTCGTCGGCAGCGGTGAAACTACCTGACTCCATCACCTTGGCAAAGATCCTCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACaa                                      <  5:18998/149‑1 (MQ=255)                                                                                                                ggTCGGCGGCAGCGGTGAAACTACCTGCCTCCATTACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACaa                                      <  7:263957/149‑1 (MQ=255)                                                                                                                ggTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACaa                                      <  6:171410/149‑1 (MQ=255)                                                                                                                 gTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAg                                     <  3:164478/149‑1 (MQ=255)                                                                                                                     gcggcAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCg                                  >  5:269341/1‑148 (MQ=255)                                                                                                                      cggcAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTCCATCTGCCTAATCTACGCACAAGTCGCa                                <  1:181963/149‑1 (MQ=255)                                                                                                                           gCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGAt                           <  6:145922/149‑1 (MQ=255)                                                                                                                             ggTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGATgg                         >  4:85271/1‑149 (MQ=255)                                                                                                                                    cTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGATGGCCCCaaa                  <  1:62623/149‑1 (MQ=255)                                                                                                                                          gCCTCCCTCACCTGGGCAAAGATCCCCATGTCTTCGAAAGCCTTCATAGTCTTGCTCTAGCAGACACTCAAACAATATATAGCGGATTTATCACACAAGAGCAACTGCCTAATCTACGCACAAGTCGAAGCGATGGCCCCAAACGCCac            >  8:240762/1‑148 (MQ=255)                                                                                                                                           ccTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGATGGCCCCAAAGGCCa             <  3:134457/147‑1 (MQ=255)                                                                                                                                               cATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTACCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGATGGCCCCAAAGGCCAGGCaa        <  3:214/148‑1 (MQ=255)                                                                                                                                                 tCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGATGGccc                      >  5:167781/1‑132 (MQ=255)                                                                                                                                                 tCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGATGGccc                      <  6:167781/132‑1 (MQ=255)                                                                                                                                                    ccTGCGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGGCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGATGGCCCCGAAGGCCAGGCAAGACGcc  <  5:17042/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CCAGTGGCGTGGCATCGAGGCGCCGGGTGGAGCGGTTGAGCAGGCGCACGCCCAGGCGCTCCTCAAGCTGCATCAGGCGCCGACTGACCGATTGCTTGGACATGCCCAGACGGTCGGCGGCAGCGGTGAAACTACCTGCCTCCATCACCTGGGCAAAGATCCGCATGTCTTCGTAAGGGTTCATTGTCTTGCTCTAGCTGACAGTCAAACACTTTATAGCGGCTTTTTCCCACAAGTGCATCTGCCTAATCTACGCACAAGTCGCAGCGATGGCCCCAAAGGCCAGGCAAGACGCC  >  NC_002947/4337031‑4337326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.