New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4763752	46 (0.880)	4 (0.080)	4/252	NT	9.4%	coding (150/1659 nt)	pvdE	pyoverdine ABC transporter ATP‑binding protein/permease
	?	NC_002947	= 4763793	34 (0.690)					coding (191/1659 nt)	pvdE	pyoverdine ABC transporter ATP‑binding protein/permease

CTGCTCAAACCCTTCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAGCGCCGATCGACCAGATCGAACGCTACCGCAGC  >  NC_002947/4763645‑4763938                                                                                                                                                      |                                                                                                                                                  cttcTCAAACCCTTCTGGCCCCTGGTGCAGGTTTCGCTCATCCTGGGCATGGTCGGGGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCgg                                                                                                                                                   <  4:211416/146‑1 (MQ=255)    cTCAAACCCTTCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgc                                                                                                                                                 >  5:40380‑M2/1‑146 (MQ=255)    cTCAAACCCTTCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGg                                                                                                                                                  >  2:202323‑M2/1‑146 (MQ=255)     tCAAACCCTTCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgctg                                                                                                                                               <  2:59025‑M2/149‑5 (MQ=255)     tCAAACCCTTCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGCTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCACCTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgctg                                                                                                                                               <  3:182574‑M2/149‑5 (MQ=255)       aaaCCCTGCTGGCCCCTGGGGACGGTTTCGATCAACCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGCCGCTCCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgctgt                                                                                                                                              >  4:173061‑M2/1‑143 (MQ=255)        aaCCCTTCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTTGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGCCGTGGTCCTGGGTTTTGCCGGgctgtg                                                                                                                                             >  1:169449‑M2/1‑143 (MQ=255)          cccTTCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCct                                                                                                                                          >  5:253804/1‑149 (MQ=255)             ttCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgctgt                                                                                                                                              >  5:300848‑M2/1‑137 (MQ=255)             ttCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgctgt                                                                                                                                              <  6:300848‑M2/142‑6 (MQ=255)             ttCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCctgct                                                                                                                                       >  6:131537/1‑149 (MQ=255)                       tGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGtt                                                                                                                              >  5:261804/1‑148 (MQ=255)                       tGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGtt                                                                                                                              >  3:6668/1‑148 (MQ=255)                       tGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTc                                                                                                                             >  8:124712/1‑149 (MQ=255)                              ggTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGa                                                                                                                      >  2:171956/1‑149 (MQ=255)                                tttCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATc                                                                                                                    >  8:286984/1‑149 (MQ=255)                                     atcatcCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTc                                                                                                               <  6:81338/149‑1 (MQ=255)                                              ggCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATg                                                                                                        <  4:6668/147‑1 (MQ=255)                                               gCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATggg                                                                                                      >  5:185113/1‑148 (MQ=255)                                               gCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGc                                                                                                     <  2:319337/149‑1 (MQ=255)                                                cATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCa                                                                                                    >  7:42401/1‑149 (MQ=255)                                                                aGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGc                                                                                      <  1:59025/147‑1 (MQ=255)                                                                aGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGc                                                                                      <  4:99392/147‑1 (MQ=255)                                                                          cccTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACatcatc                                                                          <  6:134444/149‑1 (MQ=255)                                                                                 ggCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCaa                                                                                                <  2:155570/120‑1 (MQ=255)                                                                                 ggCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCaa                                                                                                >  1:155570/1‑120 (MQ=255)                                                                                    gACCATCAACTCGGCCCTGCACAGCGCCACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCGCGGACATGGGCACCAACTGGGTCGGCCCGCACATCATCGCGCGCCTgc                                                                >  2:109778/1‑149 (MQ=255)                                                                                    gACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTgc                                                                <  5:131537/149‑1 (MQ=255)                                                                                         tCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGt                                                           <  7:31617/149‑1 (MQ=255)                                                                                         tCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGt                                                           <  4:85766/149‑1 (MQ=255)                                                                                         tCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GCGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGt                                                           <  3:64586/149‑1 (MQ=255)                                                                                          cAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGt                                                           >  8:168342/1‑148 (MQ=255)                                                                                            aCTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAg                                                        <  1:171956/149‑1 (MQ=255)                                                                                            aCTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAg                                                        <  6:261804/149‑1 (MQ=255)                                                                                                ggCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgctgtgcagggccgagttgatggtcgccagcagggcggtgacactgaggccaccgaccatgcccaggatgatcgaaaccgtcaccaggggccag                                                     <  4:82189‑M2/148‑95 (MQ=255)                                                                                                 gCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTggg                                                   <  8:42401/149‑1 (MQ=255)                                                                                                   ccTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgctgtgcagggccgagttgatggtcgccagcagggcggtgacactgaggccaccgaccatgcccaggatgatcgaaaccgtcaccaggg                                                          <  1:74995‑M2/140‑90 (MQ=255)                                                                                                   ccTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgctgtgcagggccgagttgatggtcgccagcagggcggtgacactgaggccaccgaccatgcccaggatgatcgaaaccgtcaccaggg                                                          >  2:74995‑M2/1‑51 (MQ=255)                                                                                                       cacaGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGgctgtgcagggccgagttgatggtcgccagcagggcggtgacactgaggccaccgaccatgcccaggatgatcgaaaccgtcaccaggggccagaagggttt                                             >  3:82189‑M2/1‑47 (MQ=255)                                                                                                            cGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGATGTGCCTGCTGGCGCTGTTAAGCTCGATCTGATCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGTCGAGAAGGTGc                                        >  4:122892/1‑149 (MQ=255)                                                                                                                     ccTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAgcgc                               <  2:303434/149‑1 (MQ=255)                                                                                                                         aCTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTgc                                                                >  7:176986/1‑112 (MQ=255)                                                                                                                         aCTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTgc                                                                <  8:176986/112‑1 (MQ=255)                                                                                                                             aaGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAGCGCCGATCGAc                       <  6:185113/149‑1 (MQ=255)                                                                                                                               ggC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAGCGCCGATCGACCa                     <  6:253804/149‑1 (MQ=255)                                                                                                                                         cTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAg                                            >  6:41371/1‑117 (MQ=255)                                                                                                                                         cTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAg                                            <  5:41371/117‑1 (MQ=255)                                                                                                                                         cTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAGCGCCGATCGACCAGATCGAAc             <  4:182574/148‑1 (MQ=255)                                                                                                                                              ttttGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAGCGCCGATCGACCAGATCGAACGCTAcc       >  4:56587/1‑149 (MQ=255)                                                                                                                                                  gCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAgcgc                               >  2:297151/1‑121 (MQ=255)                                                                                                                                                  gCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAgcgc                               <  1:297151/121‑1 (MQ=255)                                                                                                                                                    cGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAGCGCCGATCGAc                       >  6:226713/1‑127 (MQ=255)                                                                                                                                                    cGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAGCGCCGATCGAc                       <  5:226713/127‑1 (MQ=255)                                                                                                                                                    cGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGATGGCAGCGCCGATCGACCAGATCGAACGCTACCGCAGc  >  4:220737/1‑148 (MQ=255)                                                                                                                                                      |                                                                                                                                                  CTGCTCAAACCCTTCTGGCCCCTGGTGACGGTTTCGATCATCCTGGGCATGGTCGGTGGCCTCAGTGTCACCGCCCTGCTGGCGACCATCAACTCGGCCCTGCACAGCGACACCGGCCTGACTCAAGGC‑GTGGTCCTGGGTTTTGCCGGGCTGTGCCTGCTGGCGCTGTTCAGCTCGATCTGCTCGGACATGGGCACCAACTGGGTCGGCCAGCACATCATCGCGCGCCTGCGCCGTGAGCTGGGCGAGAAGGTGCTGGCAGCGCCGATCGACCAGATCGAACGCTACCGCAGC  >  NC_002947/4763645‑4763938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.