New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4799323	59 (1.130)	4 (0.080)	4/260	NT	6.8%	coding (421/486 nt)	PP_4226	hypothetical protein
	?	NC_002947	= 4799397	52 (1.020)					intergenic (+9/‑3)	PP_4226/PP_5664	hypothetical protein/hypothetical protein

GCGCCGGAACCATTCCGCTCGCTGGTGCAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCGAGCACGGATGGTGC  >  NC_002947/4799255‑4799540                                                                                                                                                |                                                                                                                                                gcgcCGGAACCATTCCGCTCGCTGGTGCAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATgg                                                                                                                                           <  7:300013/149‑1 (MQ=255)           cATTCCGCTCGCTGGTGCAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAAttttt                                                                                                                                 <  8:246661/149‑1 (MQ=255)            aTTCCGCTCGCTGGTGCAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCCATTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAAtttt                                                                                                                                  >  1:89405/1‑148 (MQ=255)                 gctcgctGGTGCAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCct                                                                                                                           <  7:228878/149‑1 (MQ=255)                  ctcgctGGTGCAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCctc                                                                                                                          <  8:181425/149‑1 (MQ=255)                       tGGTGCAGGCGCGGTCATGGGTCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCa                                                                                                                      >  3:271648/1‑148 (MQ=255)                       tGGTGCAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAAGGGACGAATTTTTCTCCCTCTTCa                                                                                                                      >  4:228499/1‑148 (MQ=255)                         gTGCAGGCGCGGTCATTGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATa                                                                                                                    <  6:321716/148‑1 (MQ=255)                          tGCAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATaga                                                                                                                  <  5:82644/149‑1 (MQ=255)                            cAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATagaa                                                                                                                 <  4:267830/148‑1 (MQ=255)                             aGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATagaaga                                                                                                               <  7:246550/149‑1 (MQ=255)                                cgcgGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATagaaga                                                                                                               >  7:194814/1‑146 (MQ=255)                                cgcgGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATagaaga                                                                                                               <  8:194814/146‑1 (MQ=255)                                 gcgGTCATGGGCCTCAAGGTCAGTGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATg                                                                                                           <  1:53000/149‑1 (MQ=255)                                   ggTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAACGGACGAATTTTTCTCCCTCTTCATAGAAGAGATggg                                                                                                         <  3:228499/149‑1 (MQ=255)                                           gCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGa                                                                                                 >  7:23875/1‑149 (MQ=255)                                             cTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGAtt                                                                                               >  2:51924/1‑149 (MQ=255)                                                       gCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTcaggcag                                                                                      >  7:7558/1‑148 (MQ=255)                                                           ccggAGCC‑TTGGCGCGCGGGGGCTGGCCTCCCTCGCCGAGGTCTTCGTCGAGGGCCTGCCGCGTATCGGCGGATGCGGAGCGCGACAATTGACGAATTTTGCTCCCTCTTCATCGAAGAGATGGGCGAGCCGATTTTCAGCCAGGACGt                                                                                 <  4:310781/147‑1 (MQ=255)                                                           cTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTTAGGCAGGAGGt                                                                                 <  4:280426/149‑1 (MQ=255)                                                           cTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGt                                                                                 <  4:171911/149‑1 (MQ=255)                                                             ggATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGc                                                                               >  2:277610/1‑149 (MQ=255)                                                              gATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGcc                                                                              >  1:178788/1‑149 (MQ=255)                                                                  c‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGAcaaggatccagccgctgaccttgaggcccatgaccgcgcctgcaccagcgagcggaatggttccggcgccg                                                                          <  3:93920‑M2/149‑72 (MQ=255)                                                                  c‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGcctcct                                                                          >  7:227256/1‑149 (MQ=255)                                                                    ttGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGAcaaggatccagccgctgaccttgaggcccatgaccgcgcctgcaccagcgagcggaatggttccggcgccgc                                                                         <  8:123593‑M2/149‑73 (MQ=255)                                                                    ttGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCtt                                                                         >  6:45672/1‑149 (MQ=255)                                                                      ggCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCtt                                                                         <  3:72924/147‑1 (MQ=255)                                                                            cTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATa                                                                 <  4:273296/149‑1 (MQ=255)                                                                            cTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATa                                                                 <  6:173184/149‑1 (MQ=255)                                                                            cTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATa                                                                 <  8:7558/149‑1 (MQ=255)                                                                               gggCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATagag                                                              <  2:220948/149‑1 (MQ=255)                                                                                     gctTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGAcaaggatccagccgctgaccttgaggcccatgaccgcgcctgcaccagcgagcggaatggttccggcgccgccggcgaatgcgcctacc                                                        >  7:123593‑M2/1‑60 (MQ=255)                                                                                     gctTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTa                                                         >  7:8923/1‑148 (MQ=255)                                                                                       ttCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAg                                                      >  4:238311/1‑149 (MQ=255)                                                                                           aTCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGc                                                                               >  8:182546/1‑120 (MQ=255)                                                                                           aTCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGc                                                                               <  7:182546/120‑1 (MQ=255)                                                                                                 gAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGGGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTg                                            <  4:271648/149‑1 (MQ=255)                                                                                                       ttcGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCg                                         >  7:220077/1‑146 (MQ=255)                                                                                                           tcgAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAAt                                              <  7:210211/137‑1 (MQ=255)                                                                                                           tcgAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAAt                                              >  8:210211/1‑137 (MQ=255)                                                                                                            cgAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGaaa                                   <  3:16697/147‑1 (MQ=255)                                                                                                            cgAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGaaa                                   >  4:16697/1‑147 (MQ=255)                                                                                                               gggCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGtt                              <  3:238311/149‑1 (MQ=255)                                                                                                                     gCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGaa                          <  1:277610/147‑1 (MQ=255)                                                                                                                      ccGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATAc                       <  8:23875/149‑1 (MQ=255)                                                                                                                      ccGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATAc                       >  5:172081/1‑149 (MQ=255)                                                                                                                              cggcggATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGAcc                 >  1:122028/1‑147 (MQ=255)                                                                                                                               ggcggATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCGAg              >  4:242140/1‑149 (MQ=255)                                                                                                                                gcggATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCg                >  4:37270/1‑146 (MQ=255)                                                                                                                                gcggATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCg                <  3:37270/146‑1 (MQ=255)                                                                                                                                  ggATGAGGAGCGCGAcaaggatccagccgctgaccttgaggcccatgaccgcgcctgcaccagcgagcggaatggttccggcgccgccggcgaatgcgcctaccgtcgcgccaagcaggccaccggtaatggtgctgccgacgacgatc           >  4:93920‑M2/1‑15 (MQ=255)                                                                                                                                  ggATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCGAGCAc           >  2:45085/1‑149 (MQ=255)                                                                                                                                  ggATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGACGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCGAGCAc           >  3:48617/1‑149 (MQ=255)                                                                                                                                       aggagCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCGAGCACGGAt       <  2:89405/148‑1 (MQ=255)                                                                                                                                           gcgcGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCGAGCACGGATGGTGc  <  7:268573/149‑1 (MQ=255)                                                                                                                                           gcgcGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCGAGCACGGATGGTGc  <  8:8923/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                GCGCCGGAACCATTCCGCTCGCTGGTGCAGGCGCGGTCATGGGCCTCAAGGTCAGCGGCTGGATCC‑TTGGCGCGCTGGGGCTGGCTTCCATCGCCGAGTTCTTCGTCGAGGGCTTGCCGCGTATCGGCGGATGAGGAGCGCGACAATGGACGAATTTTTCTCCCTCTTCATAGAAGAGATGGGCGAGCCGATTTTCAGGCAGGAGGTGCCTCCTTCTAGCATAGAGCGCTACAGCGGTAAATTGCCGAAGAAACTGTTGGAATACTGGACCGAGCACGGATGGTGC  >  NC_002947/4799255‑4799540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.