New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6056656 =79 (1.520)4 (0.080) 4/256 NT 5.0% coding (783/927 nt) oxyR oxidative and nitrosative stress transcriptional dual regulator
?NC_002947 6056708 = 75 (1.500)coding (835/927 nt) oxyR oxidative and nitrosative stress transcriptional dual regulator

AACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTCACAGTACTGAAAGGTGTGGG  >  NC_002947/6056560‑6056850
                                                                                                                                                    |                                                                                                                                               
aaCCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTGTCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGgcgcg                                                                                                                                                 >  5:1464/1‑149 (MQ=255)
  ccATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGcc                                                                                                                                               <  1:258593/149‑1 (MQ=255)
   cATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGgcgcgc                                                                                                                                                >  6:295072/1‑147 (MQ=255)
    aggccggttgttccgcagggtttttggcgaccgagcacaggcggatcgaatcggcgaggatctcgatggcctttggccgcgggacagctggcGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGcc                                                                                                                                               >  1:97686‑M1/93‑147 (MQ=255)
    aTCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGCCGCGCCAg                                                                                                                                             >  2:295444/1‑149 (MQ=255)
     tCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGc                                                                                                                                            >  2:159085/1‑149 (MQ=255)
       cGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCtt                                                                                                                                         >  3:289112/1‑149 (MQ=255)
        gTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTc                                                                                                                                        <  1:55092/149‑1 (MQ=255)
             aTGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCcgcg                                                                                                                                   >  2:16902/1‑149 (MQ=255)
               ttccgcagggtttttggcgaccgagcacaggcggatcgaatcggcgaggatctcgatggcctttggccgcgggaagctggcGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGgcgcgc                                                                                                                                                <  8:159454‑M1/54‑1 (MQ=255)
               ttccgcagggtttttggcgaccgagcacaggcggatcgaatcggcgaggatctcgatggcctttggccgcgggaagctggcGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGgcgcgc                                                                                                                                                >  7:159454‑M1/82‑135 (MQ=255)
                gtggCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGc                                                                                                                                 >  8:78615/1‑148 (MQ=255)
                     ttCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAgg                                                                                                                           >  6:246722/1‑149 (MQ=255)
                      tCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTc                                                                                                                                        >  7:109251/1‑135 (MQ=255)
                      tCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTc                                                                                                                                        <  8:109251/135‑1 (MQ=255)
                       ccGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGc                                                                                                                          >  4:91966/1‑148 (MQ=255)
                           ccTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCgg                                                                                                                                  >  7:242017/1‑136 (MQ=255)
                           ccTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCgg                                                                                                                                  <  8:242017/136‑1 (MQ=255)
                           ccTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCg                                                                                                                     <  5:118210/149‑1 (MQ=255)
                             ttGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATc                                                                                                                      >  1:270681/1‑146 (MQ=255)
                               ggCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCgag                                                                                                                   <  7:7820/147‑1 (MQ=255)
                                gCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATc                                                                                                                >  8:86591/1‑149 (MQ=255)
                                    aTCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCg                                                                                                            >  4:237101/1‑149 (MQ=255)
                                     tCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGc                                                                                                           <  5:295072/149‑1 (MQ=255)
                                       gATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGcc                                                                                                          >  6:285915/1‑148 (MQ=255)
                                       gATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGcc                                                                                                          >  6:202025/1‑148 (MQ=255)
                                           ttGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTc                                                                                                     >  4:192719/1‑149 (MQ=255)
                                             gCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGAt                                                                                                       <  4:289112/145‑1 (MQ=255)
                                                 cTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCg                                                                                               <  4:302126/149‑1 (MQ=255)
                                                    tCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCt                                                                                            <  3:119983/149‑1 (MQ=255)
                                                    tCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCt                                                                                            <  5:202025/149‑1 (MQ=255)
                                                      ggCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCtgt                                                                                          >  2:69731/1‑149 (MQ=255)
                                                        cAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGc                                                                                        <  3:237101/149‑1 (MQ=255)
                                                             cacaGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGt                                                                                   <  8:189183/149‑1 (MQ=255)
                                                                 gCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGcc                                                                               <  4:85348/149‑1 (MQ=255)
                                                                 gCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGc                                                                                >  5:86530/1‑148 (MQ=255)
                                                                  ccaccaCTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGAtt                                                                                                      <  4:82928/125‑1 (MQ=255)
                                                                  ccaccaCTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGAtt                                                                                                      >  3:82928/1‑125 (MQ=255)
                                                                  ccaccaCTATGCCCCCGGCGTCATAGAAGTGCGCCCGATGACGGCACCGGCACCCTTCCGCACGGTAGCCATCGCCTGGCGCCCCACCTTCCCGCGTCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTAGGTCGcc                                                                               >  1:131459/1‑148 (MQ=255)
                                                                   caccacTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCa                                                                              >  4:50716/1‑148 (MQ=255)
                                                                        cTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAAcc                                                                        <  1:16902/149‑1 (MQ=255)
                                                                         tATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAAccc                                                                       >  8:133255/1‑149 (MQ=255)
                                                                           tGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCt                                                                      <  7:86591/148‑1 (MQ=255)
                                                                             cccccGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGc                                                                    <  6:1464/148‑1 (MQ=255)
                                                                             cccccGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCg                                                                   <  7:133255/149‑1 (MQ=255)
                                                                             cccccGGCGTCAGCGATGTGCGCCAGTTGACGGCACGGGCTCCGTTCCGGTCGGTAGCCATCTCCTGGCGCGCCAGCTTCCCGCGGGCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGGCTGTGCTCGGTCGCCTATAACCCTgg                                                                    <  4:257677/148‑2 (MQ=255)
                                                                              ccccGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCg                                                                   >  2:213617/1‑148 (MQ=255)
                                                                                        aTCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGa                                                                                                   >  6:25140/1‑106 (MQ=255)
                                                                                        aTCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGa                                                                                                   <  5:25140/106‑1 (MQ=255)
                                                                                        aTCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGc                                                        >  8:235340/1‑149 (MQ=255)
                                                                                        aTCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGc                                                        >  3:79263/1‑149 (MQ=255)
                                                                                          cGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGAtt                                                                                                      <  3:244860/101‑1 (MQ=255)
                                                                                          cGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGAtt                                                                                                      >  4:244860/1‑101 (MQ=255)
                                                                                            aaGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGa                                                    <  2:192710/149‑1 (MQ=255)
                                                                                            aaGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGa                                                    <  1:159085/149‑1 (MQ=255)
                                                                                             ggcgcgccaggcgatggctaccgtgcggaacggtgccggtgccgtcaacgggcgcGCCAGCTGTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCt                                                      >  1:97686‑M2/56‑147 (MQ=255)
                                                                                              gcgcgccaggcgatggctaccgtgcggaacggtgccggtgccgtcaacgggcgcGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGaa                                                                <  8:159454‑M2/81‑1 (MQ=255)
                                                                                              gcgcgccaggcgatggctaccgtgcggaacggtgccggtgccgtcaacgggcgcGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGaa                                                                >  7:159454‑M2/55‑135 (MQ=255)
                                                                                              gTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGt                                                  <  2:1591/149‑1 (MQ=255)
                                                                                              gTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGt                                                  <  7:78615/149‑1 (MQ=255)
                                                                                                 CGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGGGTCa                                                >  3:91966‑M1/1‑148 (MQ=255)
                                                                                                 CGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCa                                                >  7:235340‑M1/1‑148 (MQ=255)
                                                                                                 CGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCAt                                               >  1:69731‑M1/1‑149 (MQ=255)
                                                                                                       ttGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCAtgagtga                                         <  2:229019/149‑1 (MQ=255)
                                                                                                       ttGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCAtgagtga                                         <  1:295444/149‑1 (MQ=255)
                                                                                                         gACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCAtgagtgag                                        <  2:270681/148‑1 (MQ=255)
                                                                                                          aCGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCt                                      <  4:79263/149‑1 (MQ=255)
                                                                                                             gcaccggcaccgTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTc                                   >  1:167600/1‑149 (MQ=255)
                                                                                                               accggcaccgTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCt                                                      <  2:123188/128‑1 (MQ=255)
                                                                                                                ccggcaccgTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCAtga                                             <  2:320778/136‑1 (MQ=255)
                                                                                                                ccggcaccgTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCAtga                                             >  1:320778/1‑136 (MQ=255)
                                                                                                                   gcaccgTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGt                             >  1:151904/1‑149 (MQ=255)
                                                                                                                   gcaccgTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGt                             >  6:58798/1‑149 (MQ=255)
                                                                                                                       cgTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTcc                           <  5:215932/147‑1 (MQ=255)
                                                                                                                       cgTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTcc                           >  6:215932/1‑147 (MQ=255)
                                                                                                                        gTTCCGCACGGTATCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCgg                        <  5:285915/149‑1 (MQ=255)
                                                                                                                        gTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCg                                                                   >  2:202569/1‑106 (MQ=255)
                                                                                                                        gTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCg                                                                   <  1:202569/106‑1 (MQ=255)
                                                                                                                         aacggtgccggtgccgtcaacgggcgcGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGt                       <  2:97686‑M2/122‑1 (MQ=255)
                                                                                                                             gCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTca                     >  3:224072/1‑147 (MQ=255)
                                                                                                                                cGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTCACAGTa                <  3:50716/149‑1 (MQ=255)
                                                                                                                                cGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCAGCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTCACAGTa                <  8:158035/149‑1 (MQ=255)
                                                                                                                                      ccATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGt                                    >  5:93771/1‑123 (MQ=255)
                                                                                                                                      ccATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGt                                    <  6:93771/123‑1 (MQ=255)
                                                                                                                                       cATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCg                                                                   >  6:206622/1‑91 (MQ=255)
                                                                                                                                       cATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCg                                                                   <  5:206622/91‑1 (MQ=255)
                                                                                                                                        aTCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTCACAGTACTGAAAgg        >  6:284099/1‑149 (MQ=255)
                                                                                                                                        aTCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTCACAGTACTGAAAg         <  5:41700/148‑1 (MQ=255)
                                                                                                                                        aTCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTCACAGTACTGAAAg         >  6:41700/1‑148 (MQ=255)
                                                                                                                                             cTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTCACAGTACTGAAAGGTGTgg   <  6:86530/149‑1 (MQ=255)
                                                                                                                                              tGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTCACAGTACTGAAAGGTGTggg  >  6:268150/1‑149 (MQ=255)
                                                                                                                                                  gcGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAg                                                   <  5:22920‑M2/94‑1 (MQ=255)
                                                                                                                                                  gcGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAg                                                   >  6:22920‑M2/3‑96 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
AACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATGCCCCCGGCGTCATCGAAGTGCGCCCGTTGACGGCACCGGCACCGTTCCGCACGGTAGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCAAAGGCCATCGAGATCCTCGCCGATTCGATCCGCCTGTGCTCGGTCGCCAAAAACCCTGCGGAACAACCGGCCTGAGTCATGAGTGAGCTGTCGAAGGTCCCGGTCACAGTACTGAAAGGTGTGGG  >  NC_002947/6056560‑6056850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.