New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 80495 = | 62 (1.270) | 3 (0.070) | 3/246 | NT | 5.4% | coding (110/558 nt) | tsaC | threonylcarbamoyl‑AMP synthase |
? | NC_002947 | 80536 = | 46 (1.000) | coding (151/558 nt) | tsaC | threonylcarbamoyl‑AMP synthase |
TTCGGCCCCGGCCAGGTGCTGCTCATGCGGTCGATCCAGTCCTCGGGGAAGTCCTCGAACAGGAAGTCGAACTGACGGATATTGTCAGCGATCAGAATCAGCCCTTTATCCACAGGACGCGACTTCAGCGCCAACAGGCGATACACCGCGTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/80648‑80495 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgtcctGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCTGTT > NC_002947/80536‑80678 TTCGGCCCCGGCCAGGTGCTGCTCATGCGGTCGATCCAGTCCTCTGGGAAGTCCTCTAACAGGAAGGCGAACTGACGGATATTGTCAGCGATCAGAATCAGCCCTTTATCCACAGGACGCGACTTCAGCGCCAACAGGCGATACACCGC < 7:188127/149‑1 CTCGAACAGGAAGTCGAACTGACGGATATTGTCAGCGATCAGAATCAGCCCTTTATCCACAGGACGCGACTTCAGCGCCAACAGGCGATACACCGC > 7:155120/1‑96 CTCGAACAGGAAGTCGAACTGACGGATATTGTCAGCGATCAGAATCAGCCCTTTATCCACAGGACGCGACTTCAGCGCCAACAGGCGATACACCGC < 8:155120/96‑1 TGACGGATATTGTCAGCGATCAGAATCAGCCCTTTATCCACAGGACGCGACTTCAGCGCCAACAGGCGATACACCGC < 8:73781/77‑1 ACAGGACGCGACTTCAGCGCCAACAGGCGATACACCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGG > 2:304150/1‑149 AGGACGCGACTTCAGCGCCAACAGGCGATACACCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGG < 1:66298/148‑1 AGGACGCGACTTCAGCGCCAACAGGCGATACACCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGG > 2:66298/1‑148 CGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCTGTT > 8:262959/1‑149 TTCGGCCCCGGCCAGGTGCTGCTCATGCGGTCGATCCAGTCCTCGGGGAAGTCCTCGAACAGGAAGTCGAACTGACGGATATTGTCAGCGATCAGAATCAGCCCTTTATCCACAGGACGCGACTTCAGCGCCAACAGGCGATACACCGCGTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/80648‑80495 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgtcctGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCTGTT > NC_002947/80536‑80678 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |