New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 80495 = | 62 (1.270) | 3 (0.070) | 3/246 | NT | 5.4% | coding (110/558 nt) | tsaC | threonylcarbamoyl‑AMP synthase |
? | NC_002947 | 80536 = | 46 (1.000) | coding (151/558 nt) | tsaC | threonylcarbamoyl‑AMP synthase |
GTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCTGTTGCCC > NC_002947/80389‑80682 | ccggccaggtgctgctcatgcggtcgatccagtcctcggggaagtcctcgaacaggaagtcgaactgacggatattgtcagcgatcagaatcagccctttatccacAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCtgt > 2:304150‑M1/107‑149 (MQ=255) gTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATaaa < 4:79177/149‑1 (MQ=255) ttttCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAg > 2:256019/1‑149 (MQ=255) tttCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAgg > 7:10279/1‑149 (MQ=255) tCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGc > 3:233403/1‑149 (MQ=255) gtgtGCAACAAGCCGCACGTGAGATCCCGGCGGGCTCGGTGATCGCCTACCCGACGGAAGCGGACTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGAGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGCCt > 5:86429/1‑148 (MQ=255) gtgCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGAt > 5:308579/1‑149 (MQ=255) caacaaGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTgg < 5:74528/133‑1 (MQ=255) caacaaGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTgg > 6:74528/1‑133 (MQ=255) caacaaGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTc < 5:56868/148‑1 (MQ=255) aacaaGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCt > 7:180664/1‑148 (MQ=255) acaaGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGa < 6:17903/149‑1 (MQ=255) caaGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGAt < 1:256019/149‑1 (MQ=255) caaGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTAATTCTGAt < 5:290059/149‑1 (MQ=255) aaGCCGCACGGGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGTAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTTGCGCTGAAGTCGCGTCCTGTTGATAAAGGGCTGATTCTGATc < 6:86429/149‑1 (MQ=255) gCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCtgtg < 2:280924/126‑1 (MQ=255) gCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCtgtg > 1:280924/1‑126 (MQ=255) gaTCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATc < 2:115812/148‑1 (MQ=255) tCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGt < 3:136326/149‑1 (MQ=255) tCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGt < 4:233403/149‑1 (MQ=255) cgggcgggCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCCGACAATATCCGTCa < 8:180664/149‑1 (MQ=255) ggTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTcc < 8:10279/149‑1 (MQ=255) gTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCt < 5:178721/149‑1 (MQ=255) gCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGa < 4:12576/149‑1 (MQ=255) ggAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTcccc > 7:119949/1‑148 (MQ=255) aGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGAAGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAgg < 5:51642/149‑1 (MQ=255) gCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGa > 2:144087/1‑149 (MQ=255) gCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGa > 7:244765/1‑149 (MQ=255) cgggggCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGa < 6:61187/147‑1 (MQ=255) ggCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGTATCGa < 8:32096/149‑1 (MQ=255) gCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGAc > 1:16071/1‑149 (MQ=255) cTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCg > 6:248686/1‑149 (MQ=255) ggCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCAt < 1:144087/149‑1 (MQ=255) gCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGAc > 7:131879/1‑131 (MQ=255) gCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGAc < 8:131879/131‑1 (MQ=255) cGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGagc < 1:60599/148‑1 (MQ=255) aCCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGagcag > 7:78329/1‑148 (MQ=255) aTGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCt > 6:221924/1‑149 (MQ=255) aTGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCt > 7:84161/1‑149 (MQ=255) gAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGc > 1:90270/1‑149 (MQ=255) cGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCgg > 6:39009/1‑149 (MQ=255) acaggacgcgacttcagcgccaacaggcgatacaccgcgtcctGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCgg > 2:304150‑M2/44‑149 (MQ=255) aggacgcgacttcagcgccaacaggcgatacaccgcgtcctGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCggg > 2:66298‑M2/42‑148 (MQ=255) aggacgcgacttcagcgccaacaggcgatacaccgcgtcctGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCggg < 1:66298‑M2/107‑1 (MQ=255) GCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCa < 8:73781‑M1/77‑1 (MQ=255) GCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGCCTTCCTGTTAGAGGACTTCCCAGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGaa < 7:188127‑M1/149‑1 (MQ=255) GCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAg < 8:155120‑M1/96‑1 (MQ=255) GCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAg > 7:155120‑M1/1‑96 (MQ=255) tgtATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACAcc < 8:84161/149‑1 (MQ=255) cGCCTGTTGGCTCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTc < 2:171691/72‑1 (MQ=255) cGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTc > 1:171691/1‑72 (MQ=255) gCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACctggctg > 2:11394/1‑149 (MQ=255) ttGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGcc > 4:222198/1‑149 (MQ=255) gcgcTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGc < 2:90270/148‑1 (MQ=255) cgcTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGag > 4:197169/1‑109 (MQ=255) cgcTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCAt < 5:221924/149‑1 (MQ=255) gcTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATc < 5:39009/149‑1 (MQ=255) cTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCa < 6:308579/149‑1 (MQ=255) cgtcctGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCTGtt > 8:262959‑M2/7‑149 (MQ=255) gtgGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCTGTTGccc > 6:144060/1‑147 (MQ=255) | GTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCTGTTGCCC > NC_002947/80389‑80682 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |