| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 115374 | 56 (1.140) | 3 (0.060) | 3/248 | NT | 5.5% | coding (741/1080 nt) | PP_0109 | membrane protein |
| ? | NC_002947 | = 115409 | 51 (1.100) | coding (776/1080 nt) | PP_0109 | membrane protein | |||||
CAGTGGTGGCCAGCTGCGGACTTCAGCAACGGCTTCCACCTGACCCAGCACGTCGGCCCCAATTACCTTGGCGGGCAGTTGGACAGTGATGCGCGTACGGCCATCCACATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/115261‑115374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcagcAGCACGCAGGTCACCAGCAGCGCGCCCAGCCTGTGGCTGATGTGGATGGCCGTACGCGCATCACTGTCCAACTGCCCGCCAAGGTAATTGGGGCCGACGTGCTGGGTCAGGTGGAAGCCGTTGCTGAAGTCCGCAGCTGGCCACCACT < NC_002947/115409‑115262 CAGTGGTGGCCAGCTGCGGACTTCAGCAACGGCTTCCACCTGACCCAGCACGTCGGCCCCAATTACCTTGGCGGGCAGTTGGACAGTGATGCGCGTACGGCCATCCAC > 7:109963/1‑108CAGTGGTGGCCAGCTGCGGACTTCAGCAACGGCTTCCACCTGACCCAGCACGTCGGCCCCAATTACCTTGGCGGGCAGTTGGACAGTGATGCGCGTACGGCCATCCAC < 8:109963/108‑1 AGCTGCGGACTTCAGCAACGGCTTCCACCTGACCCAGCACGTCGGCCCCAATTACCTTGGCGGGCAGTTGGACAGTGATGCGCGTACGGCCATCCACATCAGCAGCACGCAGGTCACCAGCAGCGCGCCCAGCCTGTGGCTGATGTGGA < 1:268949/149‑1 TTCCACCTGACCCAGCACGTCGGCCCCAATTACCTTGGCGGGCAGTTGGACAGTGATGCGCGTACGGCCATCCACATCAGCAGCACGCAGGTCACCAGCAGCGCGCCCAGCCTGTGGCTGATGTGGATGGCCGTACGCGCATCACTGTC > 5:133302/1‑149 CACCTGACCCAGCACGTCGGCCCCAATTACCTTGGCGGGCAGTTGGACAGTGATGCGCGTACGGCCATCCACATCAGCAGCACGCAGGTCACCAGCAGCGCGCCCAGCCTGTGGCTGATGTGGATGGCCGTACGCGCATCACTGTCCAA < 6:133302/149‑1 CATCAGCAGCACGCAGGTCACCAGCAGCGCGCCCAGCCTGTGGCTGATGTGGATGGCCGTACGCGCATCACTGTCCAACTGCCCGCCAAGGTAATTGGGGCCGACGTGCTGGGTCAGGTGGAAGCCGTTGCTGAAGTCCGCAGCTGGCC < 5:8929/149‑1 AGCAGCACGCAGGTCACCAGCAGCGCGCCCAGCCTGTGGCTGATGTGGATGGCCGTACGCGCATCACTGTCCAACTGCCCGCCAAGGTAATTGGGGCCGACGTGCTGGGTCAGGTGGAAGCCGTTGCTGAAGTCCGCAGCTGGCCACCA > 7:99942/1‑149 CAGCACGCAGGTCACCAGCAGCGCGCCCAGCCTGTGGCTGATGTGGATGGCCGTACGCGCATCACTGTCCAACTGCCCGCCAAGGTAATTGGGGCCGCCGTGCTGGGTCAGGTGGAAGCCGTTGGTGAAGTCCGCAGCTGGCCACCACT > 8:84974/1‑149 CAGTGGTGGCCAGCTGCGGACTTCAGCAACGGCTTCCACCTGACCCAGCACGTCGGCCCCAATTACCTTGGCGGGCAGTTGGACAGTGATGCGCGTACGGCCATCCACATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/115261‑115374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcagcAGCACGCAGGTCACCAGCAGCGCGCCCAGCCTGTGGCTGATGTGGATGGCCGTACGCGCATCACTGTCCAACTGCCCGCCAAGGTAATTGGGGCCGACGTGCTGGGTCAGGTGGAAGCCGTTGCTGAAGTCCGCAGCTGGCCACCACT < NC_002947/115409‑115262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |