New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 144237	46 (0.940)	6 (0.130)	4/244	NT	12.7%	intergenic (+216/‑530)	PP_0136/gltP	hypothetical protein/glutamate/aspartate‑proton DAACS transporter
	?	NC_002947	= 144275	40 (0.880)					intergenic (+254/‑492)	PP_0136/gltP	hypothetical protein/glutamate/aspartate‑proton DAACS transporter

TCTATAGTTCAGCCTTCTATGATGCGCCGCCCCGAGGAGGGGTAGCACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAG‑‑TC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/144082‑144237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggaag‑‑tcAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGGTCATG  <  NC_002947/144275‑144129                                                                                                                                                                                                                                                                                                                   TCTATAGTTCAGCCTTCTATGATGCGCAGCCCCGAGGAGGGGTAGCACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGTAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAAT                                                                                                                                                               <  7:272545/148‑1                                              CACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAG‑‑TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCT                                                                                                                 >  7:182859/1‑147                                                     CCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAG‑‑TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCC                                                                                                        <  8:182859/149‑1                                                                        TGATTGTTACAGGACCGGACTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATCGGCCGGGTCAGGAAAGGCGGAATCGGAA                                                                                                                                                          >  3:115973/1‑82                                                                                  AGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAGTCTCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGA                                                                                                               <  3:93804/115‑1                                                                                  AGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAGTCTCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGA                                                                                                               >  4:93804/1‑115                                                                                  AGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAG‑‑TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCC                                                                                                        >  1:78991/1‑120                                                                                  AGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAG‑‑TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCC                                                                                                        <  2:78991/120‑1                                                                                                                                                          G‑‑TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGGTCAT   >  1:77907/1‑149                                                                                                                                                             TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGGTCATG  >  4:109697/1‑149                                                                                                                                                             TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGG       <  7:23323/144‑1                                                                                                                                                             TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGG       >  8:23323/1‑144                                                                                                                                                             TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAAT                            <  6:41149/123‑1                                                                                                                                                                                                                                                                                                                   TCTATAGTTCAGCCTTCTATGATGCGCCGCCCCGAGGAGGGGTAGCACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAG‑‑TC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/144082‑144237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggaag‑‑tcAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGGTCATG  <  NC_002947/144275‑144129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.