| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 170079 | 56 (1.140) | 4 (0.090) | 4/244 | NT | 7.2% | coding (481/1221 nt) | PP_0159 | family III CoA‑transferase |
| ? | NC_002947 | = 170103 | 51 (1.120) | coding (505/1221 nt) | PP_0159 | family III CoA‑transferase | |||||
GCCTATGGCCTGGACTACCAGAGCCTCAAGGCGGTAAACCCGCAGCTCATCTATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGACCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/169926‑170079‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccggccCTGCGCCTTCTTCACCCTCCGGACGGCCGGTCAGGCTCATCAGCCCACCCAACCCCTGGATCATGAAGTCATAGCCAGCGCGCTTGGCATAGGGCCCGGTCTGACCGAAGCCGGTAATGGAGCAATAGATGAGCTGCGGGTTTACC < NC_002947/170103‑169958 GCCTATGGCCTGGACTACCAGAGCCTCAACGCGGTAAACCCGCAGCTCATCTATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGcc > 7:272974/1‑147 TATGGCCTGGACTACCAGAGCCTCAAGGCGGTAAACCCGCAGCTCATCTATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGACCGG > 8:126428/1‑149 TGGCCTGGACTACCAGAGCCTCAAGGCGGTAAACCCGCAGCTCATCTATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGACCGG < 5:127339/147‑1 CAAGGCGGTAAACCCGCAGCTCATCTATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGACCGG > 5:86579/1‑126 CAAGGCGGTAAACCCGCAGCTCATCTATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGACCGG < 6:86579/126‑1 ACCCGCAGCTCATCAATTCCTCAATTACCTGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCCGGTGTTGGGTGGGCTGATGAGCCTGACCGGCCCTGCGCCTTCTTCACCCTCCGGACGGCCGGTC < 6:275214/149‑1 CCCGCAGCTCATCTATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGACCGGCCCTGCGCCTTCTTCACCCTCCGGACGGCCGGTCA < 3:11645/149‑1 TATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGACCGGCCCTGCGCCTTCTTCACCCTCCGGACGGCCGGTCAG < 7:277397/137‑1 TATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGACCGGCCCTGCGCCTTCTTCACCCTCCGGACGGCCGGTCAG > 8:277397/1‑137 CGGCCCTGCGCCTTCTTCACCCTCCGGACGGCCGGTCAGGCTCATCAGCCCACCCAACCCCTGGATCATGAAGTCATAGCCAGCGCGCTTGGCATAGGGCCCGGTCTGACCGAAGCCGGTAATGGAGCAATAGATGAGCTGCGGGTTTA < 5:197403/149‑1 GCCCTGCGCCTTCTTCACCCTCCGGACGGCCGGTCAGGCTCATCAGCCCACCCAACCCCTGGATCATGAAGTCATAGCCAGCGCGCTTGGCATAGGGCCCGGTCTGACCGAAGCCGGTAATGGAGCAATAGATGAGCTGCGGGTTTACC < 7:249954/149‑1 GCCTATGGCCTGGACTACCAGAGCCTCAAGGCGGTAAACCCGCAGCTCATCTATTGCTCCATTACCGGCTTCGGTCAGACCGGGCCCTATGCCAAGCGCGCTGGCTATGACTTCATGATCCAGGGGTTGGGTGGGCTGATGAGCCTGACCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/169926‑170079‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccggccCTGCGCCTTCTTCACCCTCCGGACGGCCGGTCAGGCTCATCAGCCCACCCAACCCCTGGATCATGAAGTCATAGCCAGCGCGCTTGGCATAGGGCCCGGTCTGACCGAAGCCGGTAATGGAGCAATAGATGAGCTGCGGGTTTACC < NC_002947/170103‑169958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |