New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 383102 =39 (0.800)3 (0.060) 3/254 NT 7.3% coding (65/303 nt) PP_0319 hypothetical protein
?NC_002947 383137 = 38 (0.800)coding (100/303 nt) PP_0319 hypothetical protein

CCGTACCGCCTGGGCCAGGGTTTCTTCCTGGCCTTCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/383142‑383102
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGTACGGATGCTCAACAAAGCCCTTAACGAGACCAAGCGTCAGTACCCGACCTTGATCGGTGACAAACTGCTGGTGCTGGCTGCCCTTAACCTGTGCTCCAAGCAGGTT  >  NC_002947/383137‑383244
                                                                                                                                                     
CCGTACCGCCTGGGCCAGGGTTTCTTCCTGGCCTTCGGGCGGTACGGATGCTCAACAAAGCCCTTAACGAGACCAAGCGTCAGTACCCGACCTTGATCGGTGACAAACTGCTGGTGCTGGCTGCCCTTAACCTGTGCTCCAAG        <  3:10279/143‑1
CCGTACCGCCTGGGCCAGGGTTTCTTCCTGGCCTTCGGGCGGTACGGATGCTCAACAAAGCCCTTAACGAGACCAAGCGTCAGTACCCGACCTTGATCGGTGACAAACTGCTGGTGCTGGCTGCCCTTAACCTGTGCTCCAAG        >  4:10279/1‑143
  GTACCGCCTGGGCCAGGGTTTCTTCCTGGCCTTCGGGCGGTACGGATGCTCAACAAAGCCCTTAACGAGACCAAGCGTCAGTACCCGACCTTGATCGGTGACAAACTGCTGGTGCTGGCTGCCCTTAACCTGTGCTCCAAGCAGGTT  >  5:77936/1‑147
                                                                                                                                                     
CCGTACCGCCTGGGCCAGGGTTTCTTCCTGGCCTTCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/383142‑383102
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGTACGGATGCTCAACAAAGCCCTTAACGAGACCAAGCGTCAGTACCCGACCTTGATCGGTGACAAACTGCTGGTGCTGGCTGCCCTTAACCTGTGCTCCAAGCAGGTT  >  NC_002947/383137‑383244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.