New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 392752 =50 (1.020)5 (0.100) 5/256 NT 8.9% intergenic (+11/‑64) soxA/soxG sarcosine oxidase subunit alpha/sarcosine oxidase subunit gamma
?NC_002947 392785 = 54 (1.130)intergenic (+44/‑31) soxA/soxG sarcosine oxidase subunit alpha/sarcosine oxidase subunit gamma

CAGGCTGGCCAGGTCGGCATGGTGCAGTGGCGACTGGGCTTTGGCCTCGGCGCCGGGGTTTTGCTGGAAGACGTTGATAGCGCTCATTTCTTACCTGCCTTGAATTCTTGTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/392902‑392752
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGGCCAAAGCCCAGTCGCCACTGCACCATGCCGACCTGGCCAGCCTGGTAGGCAAAGGCCGCAAGAACGCAGGC  >  NC_002947/392785‑392929
                                                                                                                                                                                                                                                                                                        
CAGGCTGGCCAGGTCGGCATGGTGCAGTGGCGACTGGGCTTTGGCCTCGGCGCCGGGGTTTTGCTGGAAGACGTTGATAGCGCTCATTTCTTACCTGCCTTGAATTCTTGTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCG                                                                                                                                                     >  7:59256/1‑149
                                                                                                             GTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGG                                                                         >  3:263192/1‑116
                                                                                                             GTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGG                                                                         <  4:263192/116‑1
                                                                                                                 GTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGA                                                                           <  1:129831/110‑1
                                                                                                                 GTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGA                                                                           >  2:129831/1‑110
                                                                                                                         AGCGCAGCCGTGCAATCAGGCTGCGCTGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGGCCAAAGCCCAGTCGCCACTGCACCATGCCGACCTGGCCAGCCTGG                            >  6:206934/1‑149
                                                                                                                                                     CCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACGCCTGAGCCGAGGCCAAAGCCCAGTCGCCACTGCACCATGCCGACCTGGCCAGCCTGGTAGGCAAAGGCCGCAAGAACGCAGGC  <  7:200283/147‑1
                                                                                                                                                                                                                                                                                                        
CAGGCTGGCCAGGTCGGCATGGTGCAGTGGCGACTGGGCTTTGGCCTCGGCGCCGGGGTTTTGCTGGAAGACGTTGATAGCGCTCATTTCTTACCTGCCTTGAATTCTTGTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/392902‑392752
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGGCCAAAGCCCAGTCGCCACTGCACCATGCCGACCTGGCCAGCCTGGTAGGCAAAGGCCGCAAGAACGCAGGC  >  NC_002947/392785‑392929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.