New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 392752 = | 50 (1.020) | 5 (0.100) | 5/256 | NT | 8.9% | intergenic (+11/‑64) | soxA/soxG | sarcosine oxidase subunit alpha/sarcosine oxidase subunit gamma |
? | NC_002947 | 392785 = | 54 (1.130) | intergenic (+44/‑31) | soxA/soxG | sarcosine oxidase subunit alpha/sarcosine oxidase subunit gamma |
CAGGCTGGCCAGGTCGGCATGGTGCAGTGGCGACTGGGCTTTGGCCTCGGCGCCGGGGTTTTGCTGGAAGACGTTGATAGCGCTCATTTCTTACCTGCCTTGAATTCTTGTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/392902‑392752 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGGCCAAAGCCCAGTCGCCACTGCACCATGCCGACCTGGCCAGCCTGGTAGGCAAAGGCCGCAAGAACGCAGGC > NC_002947/392785‑392929 CAGGCTGGCCAGGTCGGCATGGTGCAGTGGCGACTGGGCTTTGGCCTCGGCGCCGGGGTTTTGCTGGAAGACGTTGATAGCGCTCATTTCTTACCTGCCTTGAATTCTTGTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCG > 7:59256/1‑149 GTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGG > 3:263192/1‑116 GTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGG < 4:263192/116‑1 GTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGA < 1:129831/110‑1 GTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGA > 2:129831/1‑110 AGCGCAGCCGTGCAATCAGGCTGCGCTGCCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGGCCAAAGCCCAGTCGCCACTGCACCATGCCGACCTGGCCAGCCTGG > 6:206934/1‑149 CCCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACGCCTGAGCCGAGGCCAAAGCCCAGTCGCCACTGCACCATGCCGACCTGGCCAGCCTGGTAGGCAAAGGCCGCAAGAACGCAGGC < 7:200283/147‑1 CAGGCTGGCCAGGTCGGCATGGTGCAGTGGCGACTGGGCTTTGGCCTCGGCGCCGGGGTTTTGCTGGAAGACGTTGATAGCGCTCATTTCTTACCTGCCTTGAATTCTTGTTCGTCAGGGCAGCGCAGCCGTGCAATCAGGCTGCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/392902‑392752 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCTGACGAACAAGAATTCAAGGCAGGTAAGAAATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGGCCAAAGCCCAGTCGCCACTGCACCATGCCGACCTGGCCAGCCTGGTAGGCAAAGGCCGCAAGAACGCAGGC > NC_002947/392785‑392929 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |