New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 578580 | 51 (1.040) | 4 (0.090) | 3/252 | NT | 7.6% | coding (549/951 nt) | fdoH | formate dehydrogenase‑O subunit beta |
? | NC_002947 | = 578607 | 48 (1.020) | coding (576/951 nt) | fdoH | formate dehydrogenase‑O subunit beta |
GCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCGTACAAGTGCACCCTGTGTTCCGATCGCGTGAGCGTGGGGCTGGAGCCGGCATGCGTGAAAACCTGCCCGACCGGGGCGATCGTGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/578429‑578580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcCGCATGCACTTTCATCTCGTCCTTGCTGCCGAACACGATC < NC_002947/578607‑578568 GCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCGAACAAGTCCACCCTGTGTTCCGATCGCGTGAGCGTGGGGCTCGAGCCGGCATGCGTGAAAACCTGCACGACCGCGGCGAACGTGTTC > 5:200855/1‑149 GCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCATACAAGTGCACCCTGTGTTCCGATCGCGTGAGCGTGGGGCTGGAGCCGGCATGCGTGAAAACCTGCCCGACCGGGGCGATCGTGTTC < 4:37382/149‑1 CTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCGTACAAGTGCACCCTGTGTTCCGATCGCGTGAGCGTGGGGCTGGAGCCGGCATGCGTGAAAACCTGCCCGACCGGGGCGATCGTGTTCGG < 1:187463/147‑1 TATCTCGCAGAAAGACCACAAGGCGTACAAGTGCACCCTGTGTTCCGATCGCGTGAGCGTGGGGCTGGAGCCGGCATGCGTGAAAACCTGCCCGACCGGGGCGATCGTGTTCGGCCGCATGCACTTTCATCTCGTCCTTGCTGCCGAAC < 4:94758/149‑1 TATCTCGCAGAAAGACCACAAGGCGTACAAGTGCACCCTGTGTTCCGATCGCGTGAGCGTGGGGCTGGAGCCGGCATGCGTGAAAACCTGCCCGACCGGGGCGATCGTGTTCGGCCGCATGCACTTTCATCTCGTCCTTGCTGCCGAAC < 6:161650/149‑1 TACAAGTGCACCCTGTGTTCCGATCGCGTGAGCGTGGGGCTGGAGCCGGCATGCGTGAAAACCTGCCCGACCGGGGCGATCGTGTTCGGCCGCATGCACTTTCATCTCGTCCTTGCTGCCGAACACGATC > 2:25219/1‑130 TACAAGTGCACCCTGTGTTCCGATCGCGTGAGCGTGGGGCTGGAGCCGGCATGCGTGAAAACCTGCCCGACCGGGGCGATCGTGTTCGGCCGCATGCACATTCATCTCGTCCTTGCTGCCGAACACGATC < 1:25219/130‑1 GCTACTGCATCACCGGCTGCCCGTTCAACATCCCGCGTATCTCGCAGAAAGACCACAAGGCGTACAAGTGCACCCTGTGTTCCGATCGCGTGAGCGTGGGGCTGGAGCCGGCATGCGTGAAAACCTGCCCGACCGGGGCGATCGTGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/578429‑578580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcCGCATGCACTTTCATCTCGTCCTTGCTGCCGAACACGATC < NC_002947/578607‑578568 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |