| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 618313 = | 56 (1.140) | 3 (0.060) | 3/248 | NT | 6.3% | coding (256/894 nt) | PP_0532 | hypothetical protein |
| ? | NC_002947 | 618371 = | 37 (0.800) | coding (198/894 nt) | PP_0532 | hypothetical protein | |||||
ACAGCGCCAGGACCTGGCCTATCACTTCACCCAGCTTGATCTGGACTCGGCCGATGGCCTGCGTCACTACCGCCTGTGGGTTGGCAAGCCGAATCGTCCAGCGCCAGCATCGGGGTACCCGGTGCTGTGGATGCTCGATGGGAATGCTGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/618467‑618313‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctggACGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGCCGAGTCCAGATCAAGCTGGGTGAAGTGATAGGCCAGGTCCTGGCGCTGTAACACCGACGTGTCCATCTTCTGGTCATGCTCGGGCTGGGCCAGGACAA > NC_002947/618371‑618516 ACAGCGCCAGGACCTGGCCTATCACTTCACCCAGCTTGATCTGGACTCGGCCGATGGCCTGCGTCACTACCGCCTGTGGGTTGGCAAGCCGAATCGTCCAGCGCCAGCATCGGGGTACCCGGTGCTGTGGATGCTCGATGGGAATGCTG > 4:272054/1‑149ACAGCGCCAGGACCTGGCCTATCACTTCACCCAGCTTGATCTGGACTCGGCCGATGGCCTGCGTCACTACCGCCTGTGGGTTGGCAAGCCGAATCGTCCAGCGCCAGCATCGGGGTACCCGGTGCTGTGGATGCTCGATGGGAATGCTG > 6:4991/1‑149 GCGCCAGGACCTGGCCTATCACTTCACCCAGCTTGATCTGGACTCGGCCGATGGCCTGCGTCACTACCGCCTGTGGGTTGGCAAGCCGAATCGTCCAGCGCCAGCATCGGGGTACCCGGTGCTGTGGATGCTCGATGGGAATGCTGCGC > 1:20787/1‑149 CCAGGACCTGGCCTATCACTTCACCCAGCTTGATCTGGACTCGGCCGATGGCCTGCGTCACTACCGCCTGTGGGTTGGCAAGCCGAATCGTCCAGCGCCAGCATCGGGGTACCCGGTGCTGTGGATGCTCGATGGGAATGCTGTGCTGG < 7:260570/149‑1 CCAGCGCCAGCATCGGGGTACCCGGTGCTGTGGATGCTCGATGGGAATGCTGCGCTGGCCGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGCCGAGTCCAGATCAAGCTGGGTGAAGTGATAGGCCAGGTCCTGG > 8:270576/1‑149 CAGCGCCAGCATCGGGGTACCCGGTGCTGTGGATGCTCGATGGGAATGCTGCGCTGGACGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGC < 5:37287/105‑1 CAGCGCCAGCATCGGGGTACCCGGTGCTGTGGATGCTCGATGGGAATGCTGCGCTGGACGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGC > 6:37287/1‑105 GCGCTGGACGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGCCGAGTCCAGATCAAGCTGGGTGAAGTGATAGGCCAGGTCCTGGCGCTGTAACACCGACGTGTCCATCTTCTGGTCATGCTCGGGCTGGGCCAG < 2:131159/148‑1 TGGACGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGCCGAGTCCAGATCAAGCTGGGTGAAGTGATAGGCCAGGTCCTGGCGCTGTAACACCGACGTGTCCATCTTCTGGTCATGCTCGGGCTGGGCCAGGAC > 5:41902/1‑147 TGGACGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGCCGAGTCCAGATCAAGCTGGGTGAAGTGATAGGCCAGGTCCTGGCGCTGTAACACCGACGTGTCCATCTTCTGGTCATGCTCGGGCTGGGCCAGGAC > 7:187785/1‑147 GACGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGCCGAGTCCAGATCAAGCTGGGTGAAGTGATAGGCCAGGTCCTGGCGCTGTAACACCGCCGTGTCCATCTTCTGGTCATGCTCGGGCTGGGCCAGGACAA > 5:275724/1‑147 GACGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGCCGAGTCCAGATCAAGCTGGGTGAAGTGATAGGCCAGGTCCTGGCGCTGTAACACCGACGTGTCCATCTTCTGGTCATGCTCGGGCTGGGCCAGGACAA > 4:271907/1‑147 ACAGCGCCAGGACCTGGCCTATCACTTCACCCAGCTTGATCTGGACTCGGCCGATGGCCTGCGTCACTACCGCCTGTGGGTTGGCAAGCCGAATCGTCCAGCGCCAGCATCGGGGTACCCGGTGCTGTGGATGCTCGATGGGAATGCTGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/618467‑618313‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctggACGATTCGGCTTGCCAACCCACAGGCGGTAGTGACGCAGGCCATCGGCCGAGTCCAGATCAAGCTGGGTGAAGTGATAGGCCAGGTCCTGGCGCTGTAACACCGACGTGTCCATCTTCTGGTCATGCTCGGGCTGGGCCAGGACAA > NC_002947/618371‑618516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |