New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 668081	34 (0.690)	3 (0.080)	3/214	NT	9.6%	intergenic (+45/+107)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	= 668150	29 (0.730)					intergenic (+114/+38)	yfhM/PP_0571	lipoprotein/membrane protein

TACCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/667911‑668081 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgcgtcgcgaCAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATCTCCCCTTGCC  <  NC_002947/668150‑668005                                                                                                                                                                                                                                                                                                                               TACCTGGCGCGAGCAGTTACCCCGGGCACCTACCGCGGGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGT                                                                                                                                                                           <  8:278570/148‑1         GCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCG                                                                                                                                                                  >  1:31564/1‑149           GAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGC                                                                                                                                                                >  6:297033/1‑149              CAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT                                                                                                                                                             <  4:229620/149‑1                    CCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCG                                                                                                                                                       >  4:53519/1‑149                     CCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGC                                                                                                                                                      >  2:71430/1‑149                                                                                                GCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGC                                                                           <  5:145786/149‑1                                                                                                                   AAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATC                                                                             >  5:136441/1‑128                                                                                                                   AAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATC                                                                             <  6:136441/128‑1                                                                                                                                                          AGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCG                 >  4:264822/1‑149                                                                                                                                                               CCTTGAGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCCCAACCACACATTACGCGTAGACCCGGTCACAACCCGGCTTTCACCGTCAT             >  6:93068/1‑148                                                                                                                                                                   ggtTCGCGACAGGGCTGCACAGCAGGCCGAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATCTC          <  5:93068/144‑1                                                                                                                                                                         CGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCAC                   <  3:277760/132‑1                                                                                                                                                                         CGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCAC                   >  4:277760/1‑132                                                                                                                                                                          GACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATCTCCCCTTGCC  >  1:244973/1‑148                                                                                                                                                                          GACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATCTCCCCTTGCC  >  8:60103/1‑148                                                                                                                                                                                                                                                                                                                               TACCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/667911‑668081 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgcgtcgcgaCAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATCTCCCCTTGCC  <  NC_002947/668150‑668005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.