New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 883223 = | 55 (1.120) | 4 (0.090) | 4/250 | NT | 7.7% | coding (826/1365 nt) | PP_0766 | hypothetical protein |
? | NC_002947 | 883266 = | 43 (0.920) | coding (869/1365 nt) | PP_0766 | hypothetical protein |
GGCGTACTTCAGCTTGGGGTCATCCAGCTTGAAGGCGTTGGAGGCGATGTACAGTTCCTTCTTGCCTTCCAGCTTCCAGTCATAACGGTCCGGTGCACCGTTGAACATGTCCAGGTTGTCCGACGTACGCAGGCCGTCGGCGGCGGTACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/883375‑883223 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctggACATGTTCAACGGTGCACCGGACCGTTATGACTGGAAGCTGGAAGGCAAGAAGGAACTGTACATCGCCTCCAACGCCTTCAAGCTGGATGACCCCAAGCTGAAGTACGCCGACATCATCAAGGCCGGGCACATCAACCAGGACCTGG > NC_002947/883266‑883412 GGCGTACTTCAGCTTGGGGTCATCCAGCTTGAAGGCGTTGGAGGCGATGTACAGTTCCTTCTTGCCTTCCAGCTTCCAGTCATAACGGTCCGGTGCACCGTTGAACATGTCCAGGTTGTCCGACGTACGCAGGCCGTCGGCGGCGGTAC > 2:112371/1‑149 ACATGTCCAGGTTGTCCGACGTACGCAGGCCGTCG‑‑GAC‑‑AACCTGGACATGTTCAACGGTGCACCGGACCGTTATGACTGGAAGCTGGAAGGCAAGAAGGAACTGTACATCGCCTCCAACGCCTTCAAGCTGGATGACCCCAAGCTGAAG > 3:61948/1‑149 ATGTCCAGGTTGTCCGACGTACGCAGGCCGTCGGCGGCGGTACCTGGACATGTTCAACGGTGCACCGGACCGTTATGACTGGAAGCTGGAAGGCAAGAAGGAACTGTACATCGCCTCCAACGCCTTCAAGCTGGATGACCCCAA > 1:282294/1‑144 ATGTCCAGGTTGTCCGACGTACGCAGGCCGTCGGCGGCGGTACCTGGACATGTTCAACGGTGCACCGGACCGTTATGACTGGAAGCTGGAAGGCAAGAAGGAACTGTACATCGCCTCCAACGCCTTCAAGCTGGATGACCCCAA < 2:282294/144‑1 GTCCAGGTTGTCCGACGTACGCAGGCCGTCGGCGGCGGTACCTGGACATGTTCAACGGTGCACCGGACCGTTATGACTGGAAGCTGGAAGGCAAGAAGGAACTGTACATCGCCTCCAACGCCTTCAAGCTGGATGACCCCAAGCTGAAG > 6:80887/1‑149 CCTGGACATGTTCAACGGTGCACCGGACCGTTATGACTGGAAGCTGGAAGGCAAGAAGGAACTGTACATCGCCTCCAACGCCTTCAAGCTGGATGACC < 2:1751/98‑1 GACATGTTCAACGGTGCACCGGACCGTTATGACTGGAAGCTGGAAGGCAAGAAGGAACTGTACATCGCCTCCAACGCCTTCAAGCTGGATGACCCCAAGCTGAAGTACGCCGACATCATCAAGGCCGGGCACATCAACCAGGACCTGG < 3:130856/148‑1 GGCGTACTTCAGCTTGGGGTCATCCAGCTTGAAGGCGTTGGAGGCGATGTACAGTTCCTTCTTGCCTTCCAGCTTCCAGTCATAACGGTCCGGTGCACCGTTGAACATGTCCAGGTTGTCCGACGTACGCAGGCCGTCGGCGGCGGTACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/883375‑883223 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctggACATGTTCAACGGTGCACCGGACCGTTATGACTGGAAGCTGGAAGGCAAGAAGGAACTGTACATCGCCTCCAACGCCTTCAAGCTGGATGACCCCAAGCTGAAGTACGCCGACATCATCAAGGCCGGGCACATCAACCAGGACCTGG > NC_002947/883266‑883412 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |