| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1011458 | 43 (0.880) | 5 (0.110) | 4/250 | NT | 9.7% | intergenic (‑396/‑131) | PP_0871/prfC | glycine betaine/carnitine/choline ABC transporter permease/peptide chain release factor 3 |
| ? | NC_002947 | = 1011497 | 52 (1.110) | intergenic (‑435/‑92) | PP_0871/prfC | glycine betaine/carnitine/choline ABC transporter permease/peptide chain release factor 3 | |||||
AAACAGCGACTTGATGTGCTGCAGGCGTTGAAATAACTGCGTTTTGGTTATTTGTCGTGATAAAGCGATTGCCTGTTGGGTTTGTTTTGTTTGTGCCGGCCTCTTCGCGGGTAAACTCGCTCCTACGAAGACTGCACCGCATCCGAACCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1011305‑1011458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgCCGGCCCCTTCGCGGGTAAACCCGCGCCTACAGGTACGACACAGGGTTCGGATGCGGTGCAGTCTTCGTAGGAGCGAGTTTACCCGCGAAGAGGCCGGCACAAACAAAACAAACCCAACAGGCAATCGCTTTATCACGACAAATAAC < NC_002947/1011497‑1011351 aacCAGCGACTTGATGTGCTGCATGCGTTGAAATAACTGAGTTTTGGTTATTTGTCTGTATAAAGCGATTTCCTGTTGGGTTTGTTTTGTTTGTTCCGGCCTCTTCGCGGGTAAACTCGCTCCTACGAAGACTGCACCGCATCCGAACC < 8:124600/146‑1AAACAGCGACTTGATGTGCTGCAGGCGTTGAAATAACTGCGTTTTGGTTATTTGTCGTGATAAAGCGATTGCCTGTTGGGTTTGTTTTGTTTGTGCCGGCCTCTTCGCGGGTAAACTCGCTCCTACGAAGACTGCACCGCATCCGAACC < 7:26578/149‑1 TGAAATAACTGCGTTTTGGTTATTTGTCGTGATAAAGCGATTGCCTGTTGGGTTTGTTTTGTTTGTGCCGGCCTCTTCGCGGGTAAACTCGCTCCTACGAAGACTGCACCGCATCCGAACCCTGTGCCGGCCCCTTAGCGGGTtttccc > 4:144034/1‑143 TTGTCGTGATAAAGCGATTGCCTGTTGGGTTTGTTTTGTTTGTGCCGGCCTCTTCGCGGGTAAACTCGCTCCTACGAAGACTGCACCGCATCCGAACCCTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTACAGGTACGACACAGG > 3:8513/1‑148 TTGTCGTGATAAAGCGATTGCCTGTTGGGTTTGTTTTGTTTGTGCCGGCCTCTTCGCGGGTAAACTCGCTCCTACGAAGACTGCACCGCATCCGAACCCTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTACAGGTACGACACAGG < 4:8513/148‑1 TTGTCGTGATAAAGCGATTGCCTGTTGGGTTTGTTTTGTTTGTGCCGGCCTCTTCGCGGGTAAACTCGCTCCTACGAAGACTGCACCGCATCCGAACCCTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTACAGGTACGACACAGG < 8:169491/148‑1 TCGTGATAAAGCGATTGCCTGTTGGGTTTGTTTTGTTTGTGCCGGCCTCTTCGCGGGTAAACTCGCTCCTACGAAGACTGCACCGCATCCGAACCCTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTACAGGTACGACACAGGGTTC < 6:150496/149‑1 GCCGGCCCCTTCGCGGGTAAACCCGCGCCTACAGGTACGACACAGGGTTCTGATGCGGTGCAGTCTTCGTAGGAGCGAGTTTACCCGCGAAGAGTCCGTCACAAACAAAACAAACCCAACAGGCAATCGCTTTATCACGACAAATAAC < 8:99349/148‑1 AAACAGCGACTTGATGTGCTGCAGGCGTTGAAATAACTGCGTTTTGGTTATTTGTCGTGATAAAGCGATTGCCTGTTGGGTTTGTTTTGTTTGTGCCGGCCTCTTCGCGGGTAAACTCGCTCCTACGAAGACTGCACCGCATCCGAACCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1011305‑1011458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgCCGGCCCCTTCGCGGGTAAACCCGCGCCTACAGGTACGACACAGGGTTCGGATGCGGTGCAGTCTTCGTAGGAGCGAGTTTACCCGCGAAGAGGCCGGCACAAACAAAACAAACCCAACAGGCAATCGCTTTATCACGACAAATAAC < NC_002947/1011497‑1011351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |