| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1098363 | 44 (0.900) | 4 (0.090) | 4/252 | NT | 7.9% | coding (216/525 nt) | kdsC | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase |
| ? | NC_002947 | = 1098419 | 51 (1.080) | coding (160/525 nt) | kdsC | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase | |||||
GTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1098300‑1098363‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGCT < NC_002947/1098419‑1098272 GTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGG < 1:103559/121‑1GTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGG > 2:103559/1‑121 GGTAGAGGTGCGGGATACCGAGGTTCCTGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCC < 1:237273/92‑1 GGTAGAGGTGCGGGATACCGAGGTTCCTGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCC > 2:237273/1‑92 CTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGCT < 3:156394/149‑1 CTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGCT < 5:71540/149‑1 CTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGC > 3:83903/1‑148 GTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1098300‑1098363‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGCT < NC_002947/1098419‑1098272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |