| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1183002 | 50 (1.020) | 4 (0.090) | 3/248 | NT | 7.7% | coding (1383/1458 nt) | mltF | membrane‑bound lytic murein transglycosylase F |
| ? | NC_002947 | = 1183025 | 48 (1.040) | coding (1360/1458 nt) | mltF | membrane‑bound lytic murein transglycosylase F | |||||
CGGGCAAGCCCGCTCCTACAGGTTCTGCGCAAATCTTGTAGGCGCGGGTTTGCCCGCGAAGAGGTCCTGACAGGCTTACATCGGCGACGACTTATCCGCTGGCTTGTCCTTGTTGACCCCGGGCACATGCAGGTTGCCCTCGGCCACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1182852‑1183002‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacctggGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGAGGGCAACCTGCATGTGCCCGGGGTCAACAAGGACAAGCCAGCGGATAAGTCGTCGCCGATGTAAGCCTGTCAGGACCTCTTCGCGGGCAAACCCGCGCCTACAAGATTTGC < NC_002947/1183025‑1182880 CGGGCAAGCCCGCTCCTACAGGTTCTGCGCAAATCTTGTAGGCGCGGGTTTGCCCGCGAAGAGGTCCTGACAGGCTTACATCGGCGACGACTTATCCGCTGGCTTGTCCTTGTTGACCCCGGGCACATGCAGGTTGCCCTCGGCCACCT > 1:243472/1‑149 GGGCAAGCCCGCTCCTACAGGTTCTGCGCAAATCTTGTAGGCGCGGGTTTGCCCGCGAAGAGGTCCTGACAGGCTTACATCGGCGACGACTTATCCGCTGGCTTGTCCTTGTTGACCCCGGGCACATGCAGGTTGCCCTCGGCCACCTG < 8:24545/149‑1 GCCCGCTCCTACAGGTTCTGCGCAAATCTTGTAGGCGCGGGTTTGCCCGCGAAGAGGTCCTGACAGGCTTACATCGGCGACGACTTATCCGCTGGCTTGTCCTTGTTGACCCCGGGCACATGCAGGTTGCCCTCGGCCACCTGGGTGAC > 3:38296/1‑149 TAGGCGCGGGTTTGCCCGCGAAGAGGTCCTGACAGGCTTACATCGGCGACGACTTATCCGCTGGCTTGTCCTTGTTGACCCCGGGCACATGCAGGTTGCCCTCGGCCACCTGGGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGAG < 5:181045/149‑1 TAGGCGCGGGTTTGCCCGCGAAGAGGTCCTGACAGGCTTACATCGGCGACGACTTATCCGCTGGCTTGTCCTTGTTGACCCCGGGCACATGCAGGTTGCCCTCGGCCACCTGGGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGA < 2:243472/148‑1 TAGGCGCGGGTTTGCCCGCGAAGAGGTCCTGACAGGCTTACATCGGCGACGACTTATCCGCTGGCTTGTCCTTGTTGACCCCGGGCACATGCAGGTTGCCCTCGGCCACCTGGGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGA < 4:38296/148‑1 GGCGCGGGTTTGCCCGCGAAGAGGTCCTGACAGGCTTACATCGGCGACGACTTATCCGCTGGCTTGTCCTTGTTGACCCCGGGCACATGCAGGTTGCCCTCGGCCACCTGGGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGAGG < 5:172899/148‑1 ACCTGGGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGAGGGCAACCTGCATGTGCCCGGGGTCAACAAGGACAAGCCAGCGGATAAGTCGTCGCCGATGTAAGCCTGTCAGGACCTCTTCGCGGGCAAACCCGCGCCTACAAGA < 1:298694/147‑1 CCTGGGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGAGGGCAACCTGCATGTGCCCGGGGTCAACAAGGACAAGCCAGCGGATAAGTCGTCGCCGATGTAAGCCTGTCAGGACCTCTTCGCGGGCAAACCCGCGCCTACAAGATTT < 5:235076/149‑1 CTGGGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGAGGGCAACCTGCATGTGCCCGGGGTCAACAAGGACAAGCCAGCGGATAAGTCGTCGCCGATGTAAGCCTGTCAGGACCTCTTCGCGGGCAAACCCGCGCCTACAAGATTTG > 1:199376/1‑149 GGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGAGGGCAACCTGCATGTGCCCGGGGTCAACAAGGACAAGCCAGCGGATAAGTCGTCGCCGATGTAAGCCTGTCAGGACCTCTTCGCGGGCAAACCCGCGCCTACAAGATTTGC < 2:199376/147‑1 CGGGCAAGCCCGCTCCTACAGGTTCTGCGCAAATCTTGTAGGCGCGGGTTTGCCCGCGAAGAGGTCCTGACAGGCTTACATCGGCGACGACTTATCCGCTGGCTTGTCCTTGTTGACCCCGGGCACATGCAGGTTGCCCTCGGCCACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1182852‑1183002‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacctggGTGACCCAGCCGCAGCTGGAAGGCCAGGTGGCCGAGGGCAACCTGCATGTGCCCGGGGTCAACAAGGACAAGCCAGCGGATAAGTCGTCGCCGATGTAAGCCTGTCAGGACCTCTTCGCGGGCAAACCCGCGCCTACAAGATTTGC < NC_002947/1183025‑1182880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |