New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1548872	50 (1.020)	4 (0.090)	4/250	NT	7.9%	coding (319/462 nt)	PP_1359	membrane protein
	?	NC_002947	= 1548903	45 (0.960)					coding (350/462 nt)	PP_1359	membrane protein

CCGTGAAAGCCTGCAGCGCGGTGAATTGCCCGCCGAGGACATGTTCCAGGGCATGATGCTGGCCGTGGGCGGTGGCCTGTTGTTGCTGCCCGGCTTCATCAGCGACGTGCTGGGTGTGCTGTGCCTGCTGCCATTCACCCGCCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1548724‑1548872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggGCCTCGGCACGCTCGCGCATCTTGCGCGCCGCCAGGCGGCGGGTG  <  NC_002947/1548903‑1548859                                                                                                                                                                                                    CCGTGAAAGCTTGCAGCGCGGTGAATTGCCCGCCGAGGACATGTTCCAGGGCATGATGCTGGCCGTGGGCGGTGGCCTGTTGTTGCTGCCCGGCTTCATCAGCGACGTGCTGGGTGTGCTGTGCCTGCTGCCATTCACCCGCCGCCTGG                                               >  7:39447/1‑149 CCGTGAAAGCCTGCAGCGCGGTGAATTGCCCGCCGAGGACATGTTCCAGGGCATGATGCTGGCCGTGGGCGGTGGCCTGTTGTTGCTGCCCGGCTTCATCAGCGACGTGCTGGGTGTGCTGTGCCTGCTGCCATTCACCCGCCGCCTGG                                               >  1:273168/1‑149 CCGTGAAAGCCTGCAGCGCGGTGAATTGCCCGCCGAGGACATGTTCCAGGGCATGATGCTGGCCGTGGGCGGTGGCCTGTTGTTGCTGCCCGGCTTCATCAGCGACGTGCTGGGTGTGCTGTGCCTGCTGCCATTCACCCGCCGCCTGG                                               <  7:232607/149‑1                             CCCGCCGAGGACATGTTCCAGGGCATGATGCTGGCCGTGGGCGGTGGCCTGTTGTTGCTGCCCGGCTTCATCAGCGACGTGCTGGGTGTGCTGTGCCTGCTGCCATTCACCCGCCGCCTGG‑‑‑‑CGGCACGCTCGCGCATCTTGCGCGCCGC               <  2:61533/149‑1                               CGCCGAGGACATGTTCCAGGGCATGATGCTGGCCGTGGGCGGTGGCCTGTTGTTGCTGCCCGGCTTCATCAGCGACGTGCTGGGTGTGCTGTGCCTGCTGCCATTCACCCGCCGCCTGGGCCTCGGCACGCTCGCGCATCTTGCGCGCC                 >  4:266151/1‑149                                        CATGTTCCAGGGCATGATGCTGGCCGTGGGCGGTGGCCTGTTGTTGCTGCCCGGCTTCATCAGCGACGTGCTGGGTGTGCTGTGCCTGCTGCCATTCACCCGCCGCCTGGGCCTCGGCACGCTCGCGCATCTTGCGCGCCGCCAGGCGG        <  3:266151/149‑1                                               CAGGGCATGATGCTGGCCGTGGGCGGTGGCCTGTTGTTGCTGCCCGGCTTCATCAGCGACGTGCTGGGTGTGCTGTGCCTGCTGCCATTCACCCGCCGCCTGGGCCTCGGCACGCTCGCGCATCTTGCGCGCCGCCAGGCGGCGGGTG  <  5:278016/148‑1                                                                                                                                                                                                    CCGTGAAAGCCTGCAGCGCGGTGAATTGCCCGCCGAGGACATGTTCCAGGGCATGATGCTGGCCGTGGGCGGTGGCCTGTTGTTGCTGCCCGGCTTCATCAGCGACGTGCTGGGTGTGCTGTGCCTGCTGCCATTCACCCGCCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1548724‑1548872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggGCCTCGGCACGCTCGCGCATCTTGCGCGCCGCCAGGCGGCGGGTG  <  NC_002947/1548903‑1548859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.