New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1643956 =	47 (0.960)	5 (0.100)	5/256	NT	9.8%	coding (786/2418 nt)	lon‑I	DNA‑binding ATP‑dependent protease
	?	NC_002947	1644028 =	46 (0.960)					coding (714/2418 nt)	lon‑I	DNA‑binding ATP‑dependent protease

TCAGTTGCAGGAAGTGCTCGACTGCGTGCCCATGCTCAAACGCATGGAAAAGGTACTGCCAATGCTGCGCAAAGAGGTGGAAGTCGCGCGCTTGCAGAACGAGATCTCGGCCGAGGTCAACCGGCAGATCGGCGAACACCAGCGCGAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1644106‑1643956 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcCACCTCTTTGCGCAGCATTGGCAGTACCTTTTCCATGCGTTTGAGCATGGGCACGCAGTCGAGCACTTCCTGCAACTGATTGCCGGTGGCCGAGGTGAGCGCGGCGGCGAAGTCGGTGAGCGGCGAAGGGTCGTTGGGGCTGAAGCG  >  NC_002947/1644028‑1644174                                                                                                                                                                                                                                                                                                            TCAGTTGCAGGAAGTGCTCGACTGCGTGCCCATGCTCAAACGCATGGAAAAGGTACTGCCAATGCTGCGCAAAGAGGTGGAAGTCGCGCGCTTGCAGAACGAGATCTCGGCCGAGGTCAACCGGCAGATCGGCGAACACCAGCGCGAGT                                                                                                                                                       >  1:298095/1‑149                                                                              TGGAAGTCGCGCGCTTGCAGAACGAGATCTCGGCCGAGGTCAACCGGCAGATCGGCGAACACCAGCGCGAGTTCCACCTCTTTGCGCAGCATTGGCAGTACCTTTTCCATGCGTTTGAGCATGGGCACGCAGTCGAGCACTTCCTGCA                                                                           >  7:52514/1‑148                                                                               GGAAGTCGCGCGCTTGCAGAACGAGATCTCGGCCGAGGTCAACCGGCAGATCGGCGAACACCAGCGCGAGTTCCACCTCTTTGCGCAGCATTGGCAGTACCTTTTCCATGCGTTTGAGCATGGGCACGCAGTCGAGCACTTCCTGCAAC                                                                         >  6:134410/1‑149                                                                                GAAGTCGCGCGCTTGCAGAACGAGATCTCGGCCGAGGTCAACCGGCAGATCGGCGAACACCAGCGCGAGTTCCACCTCTTTGCGCAGCATTGGCAGTACCTTTTCCATGCGTTTGAGCATGGGCACGCAGTCGAGCACTTCCTGCAACT                                                                        >  6:64545/1‑149                                                                                                             GGCCGAGGTCAACCGGCAGATCGGCGAACACCAGCGCGAGTTCCACCTCTTTGCGCAGCATTGGCAGTACCTTTTCCATGCGTTTGAGCATGGGCACGCAGTCGAGCACTTCCTGCAACTGATTGCCGGTGGCCGAGGTGAGCGCGGCG                                           <  8:52514/149‑1                                                                                                                            GCAGATCGGCGAACACCAGCGCGAGTTCCACCTCTTTGCGCAGCATTGGCAGTACCTTTTCCATGCGTTTGAGCATGGGCACGCAGTCGAGCACTTCCTGCAACTGATTGCCGGTGGCCGAGGTGAGCGCGGCGGCGAAGTCGGTGAGC                            <  5:134410/149‑1                                                                                                                                                       CCACCTCTTTGCGCAGCATTGGCAGTACCTTTTCCATGCGTTTGAGCATGGGCACGCAGTCGAGCACTTCCTGCAACTGATTGCCGGTGGCCGAGGTGAGCGCGGCGGCGAAGTCGGTGAGCGGCGAAGGGTCGTTGGGGCTGAAGCG  <  4:48393/148‑1                                                                                                                                                                                                                                                                                                            TCAGTTGCAGGAAGTGCTCGACTGCGTGCCCATGCTCAAACGCATGGAAAAGGTACTGCCAATGCTGCGCAAAGAGGTGGAAGTCGCGCGCTTGCAGAACGAGATCTCGGCCGAGGTCAACCGGCAGATCGGCGAACACCAGCGCGAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1644106‑1643956 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcCACCTCTTTGCGCAGCATTGGCAGTACCTTTTCCATGCGTTTGAGCATGGGCACGCAGTCGAGCACTTCCTGCAACTGATTGCCGGTGGCCGAGGTGAGCGCGGCGGCGAAGTCGGTGAGCGGCGAAGGGTCGTTGGGGCTGAAGCG  >  NC_002947/1644028‑1644174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.