New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1689328 = | 56 (1.140) | 4 (0.090) | 4/248 | NT | 6.9% | coding (209/1032 nt) | ydcT | polyamine ABC transporter ATP‑binding protein |
? | NC_002947 | 1689368 = | 55 (1.190) | coding (169/1032 nt) | ydcT | polyamine ABC transporter ATP‑binding protein |
CCTCCAGCGGTTCGATCCGCATCCAAGGGGTCGAGGCCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1689370‑1689328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctggAGGGTTGCTCGAAGCCTGCGATCAGGCGCAGGCAGGTGGTCTTGCCCGAGCCGGAAGGGCCGAGCATGGAAAAGAACTCGCCATCGATGATGTCGATGCTGACCTGGTCGACGGCCTTGACCTCGCCGAAGGTGCGGGAAACCTGG > NC_002947/1689368‑1689513 CCTCCAGCGGTTCGATCCGCATCCAAGGGGTCGAGGCCGCTGGAGGGTTGCTCGAAGCCTGCGATCAGGCGCAGGCAGGTGGTCTTGCCCGAGCCGGAAGGGCCGAGCATGGAAAAGAACTCGCCATCGATGATGTCGATGCTGACCTG > 1:224474/1‑149 CTCCAGCGGTTCGATCCGCATCCAAGGGGTCGAGGCCGCTGGAGGGTTGCTCGAAGCCTGCGATCAGGCGCAGGCAGGTGGTCTTGCCCGAGCCGGAAGGGCCGAGCATGGAAAAGAACTCGCCATCGATGATGTCGATGCTGACCTGG > 5:146489/1‑149 TCCAGCGGTTCGATCCGCATCCAAGGGGTCGAGGCCGCTGGAGGGTTGCTCGAAGCCTGCGATCAGGCGCAGGCAGGTGGTCTTGCCCGAGCCGGAAGGGCCGAGCATGGAAAAGAACTCGCCATCGATGATGTCGATGCTGACCTGGT > 4:176338/1‑149 GATCCGCATCCAAGGGGTCGAGGCCGCTGGAGGGTTGCTCGAAGCCTGCGATCAGGCGCAGGCAGGTGGTCTTGCCCGAGCCGGAAGGGCCGAGCATGGAAAAGAACTCGCCATCGATGATGTCGATGCTGACCTGGTCGACGGCCTT < 2:224474/148‑1 GCTGGAGGGCTGCTCGAAGCCTGCGATCAGGCGCAGGCAGGAGGGCTTGCCCGAGCCGGAAGGGCCGATCATGGAAAAGAACTCGCCATCGATGATGTCTATTCTGACCTGGTCGACGGCCTTGACCTCTCCGAAGGTGCGGGAAACCT < 4:214858/149‑1 TGGAGGGTTGCTCGAAGCCTGCGATCAGGCGCAGGCAGGTGGTCTTGCCCGAGCCGGAAGGGCGGAGCATGGAAAAGAACTCGCCATCGATGATGTCGATGCTGACCTGGTCGACGGCCTTGACCTCGCCGAAGGTGCGGGAAACCTGG > 4:284974/1‑149 TGGAGGGTTGCTCGAAGCCTGCGATCAGGCGCAGGCAGGTGGTCTTGCCCGAGCCGGAAGGGCCGAGCATGGAAAAGAACTCGCCATCGATGATGTCGATGCTGACCTGGTCGACGGCCTTGACCTCGCCGAAGGTGCGGGAAACCTGG < 4:146873/149‑1 CCTCCAGCGGTTCGATCCGCATCCAAGGGGTCGAGGCCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1689370‑1689328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctggAGGGTTGCTCGAAGCCTGCGATCAGGCGCAGGCAGGTGGTCTTGCCCGAGCCGGAAGGGCCGAGCATGGAAAAGAACTCGCCATCGATGATGTCGATGCTGACCTGGTCGACGGCCTTGACCTCGCCGAAGGTGCGGGAAACCTGG > NC_002947/1689368‑1689513 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |