New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1724877 =63 (1.290)4 (0.090) 4/252 NT 5.9% coding (292/687 nt) PP_1518 hypothetical protein
?NC_002947 1724925 = 66 (1.400)coding (244/687 nt) PP_1518 hypothetical protein

GCCGTCAAGCAACTGAGCACCCCAGGCGGCTTCAGCAACAACCCGGACGTGCGCATCGAGCTGCCAGGCAACCTGGGCAAAGCCGCCAAGGCGATGAAGATGTTCGGCAAGGGTGAACAGGTCGAAGCCCTGGAAACCAGCATGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1725024‑1724877
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacaTCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCA  >  NC_002947/1724925‑1725056
                                                                                                                                                                                                                                                                                        
GCCGTCAAGCAACTGAGCACCCCAGGCGGCTTCAGCAACAACCCGGACGTGCGCATCGAGCTGCCAGGCAACCTGGGCAAAGCCGCCAAGGCGATGAAGATGTTCGGCAAGGGTGAACAGGTCGAAGCCCTGGAAACCAGCATGAACA                                                                                                                                      >  6:290995/1‑148
                                                                                             ATGAAGATGTTCGGCAAGGGTGAACAGGTCGAAGCCCTGGAAACCAGCATGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTT                                        >  7:84579/1‑149
                                                                                              TGAAGATGTTCGGCAAGGGTGAACAGGTCGAAGCCCTGGAAACCAGCATGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGAGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTT                                        >  2:201008/1‑148
                                                                                                AAGATGTTCGGCAAGGGTGAACAGGTCGAAGCCCTGGAAACCAGCATGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGAGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGA                                      <  1:201008/148‑1
                                                                                                                                    GAAACCAGCATGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCA  <  8:84579/148‑1
                                                                                                                                                                                                                                                                                        
GCCGTCAAGCAACTGAGCACCCCAGGCGGCTTCAGCAACAACCCGGACGTGCGCATCGAGCTGCCAGGCAACCTGGGCAAAGCCGCCAAGGCGATGAAGATGTTCGGCAAGGGTGAACAGGTCGAAGCCCTGGAAACCAGCATGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1725024‑1724877
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacaTCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCA  >  NC_002947/1724925‑1725056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.