New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1724877 =63 (1.290)4 (0.090) 4/252 NT 5.9% coding (292/687 nt) PP_1518 hypothetical protein
?NC_002947 1724925 = 66 (1.400)coding (244/687 nt) PP_1518 hypothetical protein

TCACCGCCGCTGAGAATGCCCTTGGCATCGGTCACGCTCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCAGGCCGCCGGTG  >  NC_002947/1724777‑1725067
                                                                                                                                                      |                                                                                                                                               
tcACCGCCGCTGAGAATGCCCTTGGCATCGGTCACGCTCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACAt                                                                                                                                                 >  7:275160/1‑149 (MQ=255)
    tcaagcaactgagcaccccaggcggcttcagcaacaacccggacgtgctcatcgagctgccaggcaacctgggcaaagccgccaaggcgatgaagaTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCtt                                                                                                                                              <  1:201008‑M1/52‑1 (MQ=255)
      aagcaactgagcaccccaggcggcttcagcaacaacccggacgtgctcatcgagctgccaggcaacctgggcaaagccgccaaggcgatgaagaTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCa                                                                                                                                            >  2:201008‑M1/95‑148 (MQ=255)
      aagcaactgagcaccccaggcggcttcagcaacaacccggacgtgcgcatcgagctgccaggcaacctgggcaaagccgccaaggcgatgaagaTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCAt                                                                                                                                           >  7:84579‑M1/95‑149 (MQ=255)
       cgcTGAGAATGCCCTTGGCATCGGTCACGCTCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATc                                                                                                                                         <  1:300914/149‑1 (MQ=255)
                       ggCATCGGTCACGCTCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTg                                                                                                                          <  3:222827/148‑1 (MQ=255)
                             ggTCACGCTCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGt                                                                                                                   <  4:140834/149‑1 (MQ=255)
                                  cGCTCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTTCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCTCCTTGGCGGCTTTGCCCAGGTTGCCt                                                                                                              <  5:15483/149‑1 (MQ=255)
                                  cGCTCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCt                                                                                                              <  2:129250/149‑1 (MQ=255)
                                     tCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTggc                                                                                                                                 <  4:100910/127‑1 (MQ=255)
                                     tCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTggc                                                                                                                                 >  3:100910/1‑127 (MQ=255)
                                         gTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCt                                                                                                       >  4:95819/1‑149 (MQ=255)
                                              tcACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGATCATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGGTCGCTg                                                                                                  >  4:262238/1‑149 (MQ=255)
                                               cACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCATTGGCGACTTTGCACAGGTTGCCTGGCAGCTCGAtca                                                                                                 >  2:84759/1‑147 (MQ=255)
                                                    cATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACg                                                                                            >  1:23751/1‑149 (MQ=255)
                                                     aTCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGt                                                                                           >  3:64115/1‑149 (MQ=255)
                                                       ccaccaGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTcc                                                                                         >  5:139308/1‑149 (MQ=255)
                                                        caccaGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCg                                                                                        >  7:19802/1‑149 (MQ=255)
                                                          ccaGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCggg                                                                                      >  5:290995/1‑149 (MQ=255)
                                                           caGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCt                                                                                                       >  8:26146/1‑131 (MQ=255)
                                                           caGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCt                                                                                                       <  7:26146/131‑1 (MQ=255)
                                                           caGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCCCGTCCGGgt                                                                                     >  1:117813/1‑149 (MQ=255)
                                                            aGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGgtt                                                                                    <  7:26265/149‑1 (MQ=255)
                                                             gAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGgttg                                                                                   <  4:77508/149‑1 (MQ=255)
                                                             gAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGgttg                                                                                   <  4:73351/149‑1 (MQ=255)
                                                                tCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGttgttg                                                                                >  6:114959/1‑149 (MQ=255)
                                                                tCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGttgttg                                                                                <  6:139308/149‑1 (MQ=255)
                                                                  gCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCGGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCTCCTTGGCGACTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGc                                                                               <  1:84759/148‑1 (MQ=255)
                                                                   ccTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCATTAAGCGAACATCTTCATGCGCCTTGGCGGCTTTTCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGttgttg                                                                                >  1:249632/1‑149 (MQ=255)
                                                                   ccTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGgttgt                                                                                  >  3:97069/1‑144 (MQ=255)
                                                                   ccTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGgttgt                                                                                  <  4:97069/144‑1 (MQ=255)
                                                                   ccTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCt                                                                              >  6:140504/1‑148 (MQ=255)
                                                                   ccTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCt                                                                              >  4:16200/1‑148 (MQ=255)
                                                                             cGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTg                                                                   >  4:119055/1‑149 (MQ=255)
                                                                               gCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTGCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTggg                                                                 <  3:95819/149‑1 (MQ=255)
                                                                               gCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTGCCAGGGCTTCGACGTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTggg                                                                 <  1:89183/149‑1 (MQ=255)
                                                                                cACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTCCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTgggg                                                                >  2:189545/1‑149 (MQ=255)
                                                                                   ggcggcCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAgccgc                                                                      >  4:110872/1‑140 (MQ=255)
                                                                                   ggcggcCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAgccgc                                                                      <  3:110872/140‑1 (MQ=255)
                                                                                        ccTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGt                                                        >  6:62485/1‑149 (MQ=255)
                                                                                        ccTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGt                                                        <  2:23751/149‑1 (MQ=255)
                                                                                         cgcggcggCCTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGCACATCTGCATCGCCTTGGCGGCTTTGCCCAGGTTGCCGGGCAGCTCGATGCGCACGGCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGtt                                                       <  4:97289/147‑1 (MQ=255)
                                                                                            ggcggcTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGc                                                     <  3:16200/148‑1 (MQ=255)
                                                                                               atgaagatgttcggcaagggtgaacaggtcgaagccctggaaaccagcatgaacaTCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCtt                                                   >  7:84579‑M2/56‑149 (MQ=255)
                                                                                                tgaagatgttcggcaagggtgaacaggtcgaagccctggaaaccagcatgaacaTCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGAGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCtt                                                   >  2:201008‑M2/55‑148 (MQ=255)
                                                                                                gcTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCGAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTggg                                                                 >  1:96917/1‑132 (MQ=255)
                                                                                                gcTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTggg                                                                 <  2:96917/132‑1 (MQ=255)
                                                                                                 cTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACg                                               >  8:247849/1‑149 (MQ=255)
                                                                                                  tttGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGc                                                                               <  6:114462/116‑1 (MQ=255)
                                                                                                  tttGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGc                                                                               >  5:114462/1‑116 (MQ=255)
                                                                                                  tttGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCtt                                                   <  3:295431/144‑1 (MQ=255)
                                                                                                  tttGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCtt                                                   >  4:295431/1‑144 (MQ=255)
                                                                                                  tttGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACgg                                              >  6:4175/1‑149 (MQ=255)
                                                                                                  aagatgttcggcaagggtgaacaggtcgaagccctggaaaccagcatgaacaTCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGAGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGa                                                 <  1:201008‑M2/96‑1 (MQ=255)
                                                                                                    TGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGc                                             >  6:290995‑M1/1‑148 (MQ=255)
                                                                                                         aTGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTg                                       >  1:66097/1‑149 (MQ=255)
                                                                                                            cTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGGAGCTCGATGCGCACGTCCGGgtt                                                                                    >  1:97879/1‑101 (MQ=255)
                                                                                                            cTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGgtt                                                                                    <  2:97879/101‑1 (MQ=255)
                                                                                                            cTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTgcg                                     >  8:249076/1‑148 (MQ=255)
                                                                                                            cTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTgcg                                     >  3:15580/1‑148 (MQ=255)
                                                                                                             tGGTTTCCAGGGCTTCGACCTGTTAACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTTCCTGGCAGCTCGATGCGCACGTACGGGTTGTTGCTGAAGCAGCCTGGGGTGCTCAGTTGATTGACGGCCAGTTGCGCa                                   >  3:127046/1‑149 (MQ=255)
                                                                                                                  tCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCtt                               <  3:119055/148‑1 (MQ=255)
                                                                                                                  cccAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCtt                               <  1:189545/147‑1 (MQ=255)
                                                                                                                   ccAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTg                              <  4:15580/148‑1 (MQ=255)
                                                                                                                    cAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTggg                            >  4:10955/1‑149 (MQ=255)
                                                                                                                    cAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTgg                             <  7:249076/148‑1 (MQ=255)
                                                                                                                            cGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTGCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAggg                      <  4:64115/147‑1 (MQ=255)
                                                                                                                                cTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAg                                                         <  7:209825/108‑1 (MQ=255)
                                                                                                                                cTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAg                                                         >  8:209825/1‑108 (MQ=255)
                                                                                                                                   ttCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCa             <  8:275160/149‑1 (MQ=255)
                                                                                                                                   ttCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGACAGTTGCGCACCTTGGGTCAGGGCATCttt               >  3:218583/1‑147 (MQ=255)
                                                                                                                                      gaaaccagcatgaacaTCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCa             <  8:84579‑M2/132‑1 (MQ=255)
                                                                                                                                      aCCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCAGgc          >  6:115478/1‑149 (MQ=255)
                                                                                                                                        ccTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGtt                                                       <  6:281332/102‑1 (MQ=255)
                                                                                                                                        ccTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCAGgccg        >  3:162441/1‑149 (MQ=255)
                                                                                                                                               ccGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCAGGCCGCCGGt   >  4:288456/1‑149 (MQ=255)
                                                                                                                                                cGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCAGGCCGCCGGTg  <  5:114959/149‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                               
TCACCGCCGCTGAGAATGCCCTTGGCATCGGTCACGCTCATGTTCTTCACGGCATCCACCAGAATCGCCTGGGCCTGCGGCACGGCGGCCTCGGCGGCTTTGTTCATGCTGGTTTCCAGGGCTTCGACCTGTTCACCCTTGCCGAACATCTTCATCGCCTTGGCGGCTTTGCCCAGGTTGCCTGGCAGCTCGATGCGCACGTCCGGGTTGTTGCTGAAGCCGCCTGGGGTGCTCAGTTGCTTGACGGCCAGTTGCGCACCTTGGGTCAGGGCATCTTTCAGGCCGCCGGTG  >  NC_002947/1724777‑1725067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.