New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1791893	45 (0.920)	3 (0.060)	3/252	NT	6.3%	coding (543/1359 nt)	rseP	regulatory intramembrane protein RIP
	?	NC_002947	= 1791932	46 (0.980)					coding (582/1359 nt)	rseP	regulatory intramembrane protein RIP

GTTATCGGCGCGGTCGACAGTGGCAGCCTGGCAGCATCTGCAGGGCTGACCGCGGGTCAGGAAATTGTTTCTGTGGATGGCAAGCCGACCAACGGTTGGTCGGCGGTCAATTTGCAGCTGGTTCGTCGTCTGGGCGAGAGCGGTACCTTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1791741‑1791893 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCACGCCAATCTGCAAGGTACCGCTCTCGCCCAGACGACGAACCAGCTGCAAATTGACCGCCGACCAACCGTTGGTCGGCTTGCCATCCACAGAAACAATTTCCTGACCCGCGGTCAGC  <  NC_002947/1791932‑1791785                                                                                                                                                                                                                                                                                                               GTTATCGGCGCGGTCGACAGTGGCAGCCTGGCAGCATCTGCAGGGCTGACCGCGGGTCAGGAAATTGTTTCTGTGGATGGCAAGCCGACCAACGGTTGGTCGGCGGTCAATTTGCAGCTGGTTCGTCGTCTGGGCGAGAGCGGTACCTT                                                                                                                                                          <  4:118116/149‑1      CGGCGCGGTCGACAGTGGCAGCCTGGCAGCATCTGCAGGGCTGACCGCGGGTCAGGAAATTGTTTCTGTGGATGGCAAGCCGCCCAACGGATGGGCGGCGGTCAATTTGCAGCTGGTTCGTCGTCTGGGCGAGAGCGGTCCCTTG                                                                                                                                                         >  8:45066/1‑145                                     TCTGCAGGGCTGACCGCGGGTCAGGAAATTGTTTCTGTGGATGGCAAGCCGACCAACGGTTGGTCGGCGGTCAATTTGCAGCTGGTTCGTCGTCTGGGCGAGAGCGGTACCTTGCAGCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCA                                                                                                                      >  5:169626/1‑149                                                 ACCGCGGGTCAGGAAATTGTTTCTGTGGATGGCAAGCCGACCAACGGTTGGTCGGCGGTCAATTTGCAGCTGGTTCGTCGTCTGGGCGAGAGCGGTACCTTGCAGCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCACGCCAATCTGC                                                                                                           <  6:169626/148‑1                                                  CCGCGGGTCAGGAAATTGTTTCTGTGGATGGCAAGCCGACCAACGGTTGGTCGGCGGTCAATTTGCAGCTGGTTCGTCGTCTGGGCGAGAGCGGTACCTTGCAGCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCACGCCAATCTGCAA                                                                                                         <  7:208914/149‑1                                                                                                                                                       CAGCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCACGCCAATCTGCAAGGTACCGCTCTCGCCCAGACGACGAACCAGCTGCAAATTGACCGCCGACCAACCGTTGGTCGGCTTGCCATCCACAGAAACAATTTCCTGACCCGCGGT      <  2:234828/147‑1                                                                                                                                                       CAGCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCACGCCAATCTGCAAGGTACCGCTCTCGCCCAGACGACGAACCAGCTGCAAATTGACCGCCGACCAACCGT                                                 <  2:293316/104‑1                                                                                                                                                       CAGCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCACGCCAATCTGCAACGTACCGCTCTCGCCCAGACGACGAACCAGCTGCAAATTGACCGCCGACCAACCGTTGGTCGGCTTGCCATCCACAGAAACAATTTCCTGACCCGCGGT      <  2:230888/147‑1                                                                                                                                                         GCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCACGCCAATCTGCAAGGTGCCGCTCTCGCCCAGACGACGAACCAGCTGCAAATTGACCGCCGCCCAACCGTTGGTCGGCTTGCCATCCACAGAAACAATTTCCTGACCCGCGGTCAGC  >  8:261182/1‑149                                                                                                                                                         GCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCACGCCAATCTGCAAGGTACCGCTCTCGCCCAGACGACGAACCAGCTGCAAATTGACCGCCGACCAACCGTTGGTCGGCTTGCCATCCACAGAAACAATTTCCTGACCCGCGGTCAGC  >  3:208630/1‑149                                                                                                                                                                                                                                                                                                               GTTATCGGCGCGGTCGACAGTGGCAGCCTGGCAGCATCTGCAGGGCTGACCGCGGGTCAGGAAATTGTTTCTGTGGATGGCAAGCCGACCAACGGTTGGTCGGCGGTCAATTTGCAGCTGGTTCGTCGTCTGGGCGAGAGCGGTACCTTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1791741‑1791893 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagCTGGCGCTCGGCGCTGGCGCCCTCATCGCGCACGCCAATCTGCAAGGTACCGCTCTCGCCCAGACGACGAACCAGCTGCAAATTGACCGCCGACCAACCGTTGGTCGGCTTGCCATCCACAGAAACAATTTCCTGACCCGCGGTCAGC  <  NC_002947/1791932‑1791785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.