| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1974048 | 42 (0.860) | 3 (0.060) | 3/254 | NT | 6.8% | coding (58/1086 nt) | serC | 3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| ? | NC_002947 | = 1974073 | 42 (0.890) | coding (83/1086 nt) | serC | 3‑phosphoserine/phosphohydroxythreonine aminotransferase | |||||
CGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGCAGGCCCTGCCGCGCTTCCTGACGCTGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1973899‑1974048‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccAGCATCTCGGCCTGTGCGCGCTGCAGGACAGCGTCAGGAAGCGCGGCAGGGCCTGCGCAGAAGTTAAAGGCTCGTTTGCTCACATCCACTCTCGCTCTGCCAAATAGAACAAAATCGTAATTCGGTGGCCACATTCCATGCAGGAT < NC_002947/1974073‑1973928 CGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGCAGGCCCTGCCGCGCTTCCTGACGCTGTC > 5:21836/1‑149CGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGCAGGCCCTGCCGCGCTTCCTGACGCTGTC < 6:3233/149‑1 ATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGCAGGCCCTGCCGCGCTTCCTGACGCTGTCCAGCATCTCGGCCTGTGCGCGCTACAGGACAGCGTC < 3:179467/149‑1 TGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGCAGGCCCTGCCGCGCTTCCTGACGCTGTCCAGCATCTCGGCCTGTGCGCGCTGCAGGACAGCGTCA < 1:152767/149‑1 TGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGCAGGCCCTGCCGCGCTTCCTGACGCTGTCCAGCATCTCGGCCTGTGCGCGCTGCAGGACAGCGT > 2:152767/1‑147 TCCAGAATCTCGGCCTGTGCGCGCTGCAGGACAGCGTCAGGAAGCGCGGCAGGGCCTGCGCAGAAGTTAAAGGCTCGTTTGCTCACATCCACTCTCGCTCTGCCAAATAGAACAAAATCGTAATTCGGTGGCCACATTCCATGCAGGAT > 6:140272/1‑149 CGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGCAGGCCCTGCCGCGCTTCCTGACGCTGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1973899‑1974048‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccAGCATCTCGGCCTGTGCGCGCTGCAGGACAGCGTCAGGAAGCGCGGCAGGGCCTGCGCAGAAGTTAAAGGCTCGTTTGCTCACATCCACTCTCGCTCTGCCAAATAGAACAAAATCGTAATTCGGTGGCCACATTCCATGCAGGAT < NC_002947/1974073‑1973928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |