New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 207180647 (0.960)3 (0.060) 3/248 NT 5.5% coding (1602/2133 nt) PP_1847 TonB‑dependent ferric siderophore receptor
?NC_002947 = 2071852 58 (1.250)coding (1556/2133 nt) PP_1847 TonB‑dependent ferric siderophore receptor

TGGCTGCCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2071652‑2071806
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaacTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGATCCGCCAGGCGTACCAGTACGCGCGCCCGGACGGCACCGGCAACTTCACCTACGTACAGCAAGGCCAGCAGAAGAATACCGGCCTGGAACTGGG  <  NC_002947/2071852‑2071705
                                                                                                                                                                                                                                                                                                               
TGGCTGCCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATC                                                                                                                                                            <  7:287899/149‑1
  GCTGCCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTG                                                                                                                                                          <  5:151833/149‑1
      CCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAA                                                                                                                                                       <  1:108417/148‑1
      CCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGA                                                                                                                                                        <  8:70775/147‑1
                                                        AGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAACTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTC                                                                                                    <  3:269826/149‑1
                                                        AGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAACTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTC                                                                                                    >  4:269826/1‑149
                                                             CAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAACTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGA                                                                                                <  4:66108/148‑1
                                                                                                                                                         ACTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGATCCGCCAGGCGTACCAGTACGCGCGCCCGGACGGCACCGGCAACTTCACCTACGTACAGCAAGGCCAGCAGAAGAATACCGGCCTGGAACTGG   <  8:76471/149‑1
                                                                                                                                                          CTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGATCCGCCAGGCGTACCAGTACGCGCGCCCGGACGGCACCGGCAACTTCACCTACGTACAGCAAGGCCAGCAGAAGAATACCGGCCTGGAACTGGG  <  7:211633/149‑1
                                                                                                                                                                                                                                                                                                               
TGGCTGCCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2071652‑2071806
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaacTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGATCCGCCAGGCGTACCAGTACGCGCGCCCGGACGGCACCGGCAACTTCACCTACGTACAGCAAGGCCAGCAGAAGAATACCGGCCTGGAACTGGG  <  NC_002947/2071852‑2071705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.