New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2071806 | 47 (0.960) | 3 (0.060) | 3/248 | NT | 5.5% | coding (1602/2133 nt) | PP_1847 | TonB‑dependent ferric siderophore receptor |
? | NC_002947 | = 2071852 | 58 (1.250) | coding (1556/2133 nt) | PP_1847 | TonB‑dependent ferric siderophore receptor |
TGGCTGCCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2071652‑2071806 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaacTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGATCCGCCAGGCGTACCAGTACGCGCGCCCGGACGGCACCGGCAACTTCACCTACGTACAGCAAGGCCAGCAGAAGAATACCGGCCTGGAACTGGG < NC_002947/2071852‑2071705 TGGCTGCCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATC < 7:287899/149‑1 GCTGCCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTG < 5:151833/149‑1 CCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAA < 1:108417/148‑1 CCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGA < 8:70775/147‑1 AGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAACTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTC < 3:269826/149‑1 AGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAACTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTC > 4:269826/1‑149 CAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAACTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGA < 4:66108/148‑1 ACTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGATCCGCCAGGCGTACCAGTACGCGCGCCCGGACGGCACCGGCAACTTCACCTACGTACAGCAAGGCCAGCAGAAGAATACCGGCCTGGAACTGG < 8:76471/149‑1 CTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGATCCGCCAGGCGTACCAGTACGCGCGCCCGGACGGCACCGGCAACTTCACCTACGTACAGCAAGGCCAGCAGAAGAATACCGGCCTGGAACTGGG < 7:211633/149‑1 TGGCTGCCGCACTGGCCTGTACCTGCAGATTCGGGGTTACCCGGCCGCTGGCGCCCAGTTCCAGGCCGGTATTCTTCTGCTGGCCTTGCTGTACGTAGGTGAAGTTGCCGGTGCCGTCCGGGCGCGCGTACTGGTACGCCTGGCGGATCTGGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2071652‑2071806 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaacTGGGCGTCAAGCACGACTGGCAAGGCCTGAGCCTGAGTGCCGCCCTGTTCCAGATCCGCCAGGCGTACCAGTACGCGCGCCCGGACGGCACCGGCAACTTCACCTACGTACAGCAAGGCCAGCAGAAGAATACCGGCCTGGAACTGGG < NC_002947/2071852‑2071705 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |