New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2360109 =	44 (0.900)	5 (0.110)	5/252	NT	8.6%	coding (1048/1134 nt)	PP_2075	membrane protein
	?	NC_002947	= 3840158	64 (1.360)					coding (1081/1158 nt)	PP_3389	membrane protein

GCTGGCCGAAGGTCATCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCACCCGCAATCCAGGCACGCCTGCTCGCCAACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2360219‑2360109 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGAGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCG  <  NC_002947/3840158‑3840052                                                                                                                                                                                                                            GCTGGCCGAAGGTCATCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCACCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTG                                                                       <  7:256156/149‑1               ATCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCACCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG                                                                          <  5:52113/132‑1               ATCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCACCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG                                                                          >  6:52113/1‑132                                   CGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCACCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGC                                                                           >  7:180924/1‑111                                   CGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCACCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGC                                                                           <  8:180924/111‑1                                                                                                            GCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGAGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCG  <  7:70037/111‑1                                                                                                            GCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGAGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCG  >  8:70037/1‑111                                                                                                                                                                                                                            GCTGGCCGAAGGTCATCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCACCCGCAATCCAGGCACGCCTGCTCGCCAACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2360219‑2360109 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGAGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCG  <  NC_002947/3840158‑3840052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.