New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2360109 =	44 (0.900)	5 (0.110)	5/252	NT	8.6%	coding (1048/1134 nt)	PP_2075	membrane protein
	?	NC_002947	= 3840158	64 (1.360)					coding (1081/1158 nt)	PP_3389	membrane protein

GATGATGGATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAGCCAG  >  NC_002947/2359962‑2360251                                                                                                                                                    |                                                                                                                                               gatgatGGATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGCGCTGCCAGCGGTCg                                                                                                                                               >  5:234960/1‑149 (MQ=255)   tgatgGATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGc                                                                                                                                             <  4:184573/149‑1 (MQ=255)      tgGATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGt                                                                                                                                           <  2:253633/148‑1 (MQ=255)        gATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTgg                                                                                                                                        >  6:156358/1‑149 (MQ=255)        gATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTg                                                                                                                                         <  2:70206/148‑1 (MQ=255)            tGCATCGTACTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGa                                                                                                                                     <  7:150265/148‑1 (MQ=255)               aTCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAg                                                                                                                                 <  8:228251/149‑1 (MQ=255)                  gTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGc                                                                                                                               <  1:49044/148‑1 (MQ=255)                       gcAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCt                                                                                                                         >  4:21660/1‑149 (MQ=255)                       gcAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCt                                                                                                                         >  8:61385/1‑149 (MQ=255)                        cAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGTGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCt                                                                                                                         <  7:213798/148‑1 (MQ=255)                          aCTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGa                                                                                                                      <  8:30267/149‑1 (MQ=255)                               cTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCg                                                                                                                 <  3:21660/149‑1 (MQ=255)                                 gCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGTTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCgg                                                                                                                >  1:190275/1‑148 (MQ=255)                                 gCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGTTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCgg                                                                                                                <  2:190275/148‑1 (MQ=255)                                    gATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCgggtgg                                                                                                            <  2:62032/149‑1 (MQ=255)                                         cggcaagccagtcccacccgtgacaaccctgagcgactaccctcccgcaatccaggcacgcctgctcgccaacgccgaccgctggcagctcaagcccggcaagcggccggc                                                                                                                                             <  7:70037‑M1/4‑1 (MQ=255)                                         cggcaagccagtcccacccgtgacaaccctgagcgactaccctcccgcaatccaggcacgcctgctcgccaacgccgaccgctggcagctcaagcccggcaagcggccggc                                                                                                                                             >  8:70037‑M1/108‑111 (MQ=255)                                           tGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCg                                                                                                     <  7:61385/149‑1 (MQ=255)                                                     gCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCgggtgg                                                                                                            >  7:33155/1‑132 (MQ=255)                                                     gCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCgggtgg                                                                                                            <  8:33155/132‑1 (MQ=255)                                                       aGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGt                                                                                          >  5:218307/1‑148 (MQ=255)                                                         ttGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCAc                                                                                       >  5:283255/1‑149 (MQ=255)                                                          tGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACg                                                                                      >  4:115514/1‑149 (MQ=255)                                                                  tCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGAc                                                                              >  4:12219/1‑149 (MQ=255)                                                                              gCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCggg                                                                  <  5:156358/149‑1 (MQ=255)                                                                                   ttGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCtt                                                                        <  2:144641/138‑1 (MQ=255)                                                                                      aggagTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAgg                                                              <  4:68971/145‑1 (MQ=255)                                                                                      aggagTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAgg                                                              >  3:68971/1‑145 (MQ=255)                                                                                        gagTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCTAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAggccggcc                                                        >  1:278428/1‑149 (MQ=255)                                                                                           tAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAggccg                                                           <  5:259582/143‑1 (MQ=40)                                                                                           tAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAggccg                                                           >  6:259582/1‑143 (MQ=40)                                                                                             gagCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTcgcg                                                   >  8:29115/1‑149 (MQ=39)                                                                                                cgcTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGTGCAGGCCGGCCTCGCGGAt                                                <  6:283255/149‑1 (MQ=37)                                                                                                cgcTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGAt                                                <  3:115514/149‑1 (MQ=37)                                                                                                 gcTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGAt                                                >  2:214692/1‑148 (MQ=35)                                                                                                     gCGGGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGGCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGAcc                                            <  8:86226/148‑1 (MQ=21)                                                                                                      cGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCtt                                          >  4:289818/1‑149 (MQ=34)                                                                                                       gTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTc                                         >  5:101693/1‑149 (MQ=34)                                                                                                        tGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCg                                        <  7:29115/149‑1 (MQ=34)                                                                                                          gTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGc                                      >  2:108477/1‑149 (MQ=33)                                                                                                              caacgccgaccgctggcagctcaagcccggcaagcggcCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAgc                                  <  7:256156‑M1/111‑1 (MQ=255)                                                                                                                 cgccgaccgctggcagctcaagcccggcaagcggcCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGAt                                                >  6:52113‑M1/36‑132 (MQ=255)                                                                                                                 cgccgaccgctggcagctcaagcccggcaagcggcCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGAt                                                <  5:52113‑M1/97‑1 (MQ=255)                                                                                                                  gccggccgCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGcgcg                               <  3:289818/148‑1 (MQ=32)                                                                                                                  gccgaccgctggcagctcaagcccggcaagcggcCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCg                                                                    >  7:180924‑M1/35‑111 (MQ=255)                                                                                                                  gccgaccgctggcagctcaagcccggcaagcggcCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCg                                                                    <  8:180924‑M1/77‑1 (MQ=255)                                                                                                                              ccGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCTAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCcagcaca                   <  2:278428/148‑1 (MQ=17)                                                                                                                                      gAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGAt                                                <  2:2680/111‑1 (MQ=32)                                                                                                                                       aGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCt         <  3:12219/149‑1 (MQ=32)                                                                                                                                       aGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCt         <  6:218307/149‑1 (MQ=32)                                                                                                                                          tGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAg      >  8:109947/1‑149 (MQ=32)                                                                                                                                              aGCGGTCGGCGTTGGCGAGCAGGCGTGCGTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAGCCAg  >  1:175423/1‑149 (MQ=17)                                                                                                                                                    |                                                                                                                                               GATGATGGATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTTTTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAGCCAG  >  NC_002947/2359962‑2360251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.