New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2432060	32 (0.650)	3 (0.060)	3/252	NT	8.7%	intergenic (‑104/‑69)	PP_2130/uup	lytic transglycosylase/ABC transporter ATP‑binding protein
	?	NC_002947	= 2432095	32 (0.680)					intergenic (‑139/‑34)	PP_2130/uup	lytic transglycosylase/ABC transporter ATP‑binding protein

GCGGAGCCAGCACTATTGAAAGCTATTGCCTTAGCTTAGCTGTTTGCCGGCAGTGGGTGAAAGCACTGTGCTTGTATCGGGATATTAAGTTCGACCAGATGTCGCCAGGTGCCTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2431944‑2432060 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaccTGACTTGGCCTTCGACGGCATCCGCCAGGCCAACCGGTAGGCACCTGGCGACATCTGGTCGAACTTAATATCCCGATACAAGCACAGTGCTTTCACCCACTGCCGGCAAACAGCTAAGCTAAGGCAATAGCTTTCAATAGTGCTGGC  <  NC_002947/2432095‑2431949                                                                                                                                                                                                                                                                          GCGGAGCCAGCACTATTGAAAGCTATTGCCTTAGCTTAGCTGTTTGCCGGCAGTGGGTGAAAGCACTGTGCTTGTATCGGGATATTAAGTTCGACCAGATGTCGCCAGGTGCCTACCTGACTTGGCCTTCGACGGCATCCGCCAGGCC                                                                                                                      >  2:146819/1‑148            ACTATTGACAGCTATTTCCTTCGCTTTGCTGTTTGCCGGCAGTGCGTGAAAGCACTCTGCTTGTATCGGCAAATTAAGTTCGACCAGATGTCGCCAGGTGCCTACCTGACTTTGCCTTCGACGGCATCCGCCAGGCCAACCGGTAGGCA                                                                                                          <  6:125285/149‑1                  GAAAGCTATTGCCTTAGCTTAGCTGTTTGCCGGCAGTGGGTGAAAGCACTGTGCTTGTATCGGGATATTAAGTTCGACCAGATGTCGCCAGGTGCCTACCTGACTTGGCCTTCGACGGCATCCGCCAGGCCAACCGGTAGGCACCTGG                                                                                                     <  1:146819/148‑1                                                                                                                  TACCTGACTTGGCCTTCGACTGCATCCGCCAGGCCAACCGGTAGGCACCTGGCGACATCTGGTCGAACTTAATATCCCGATACAAGCACAGTGCTTTCACCCACTGCCGGCAAACAGCTAAGCTAAGGCAATA                    <  4:179098/133‑1                                                                                                                   ACCTGACTTGGCCTTCGACGGCATCCGCCAGGCCAACCGGTAGGCACCTGGCGACATCTGGTCGAACTTAATATCCCGATACAAGCACAGTGCTTTCACCCACTGCCGGCAAACAGCTAAGCTAAGGCAATAGCTTTCAATAGTGCTGG   >  2:260987/1‑149                                                                                                                    CCTGACTTGGCCTTCGACGGCATCCGCCAGGCCAACCGGTAGGCACCTGGCGACATCTGGTCGAACTTAATATCCCGATACAAGCACAGTGCTTTCACCCACTGCCGGCAAACAGCTAAGCTAAGGCAACAGCTTTCAATAGTGCTGGC  <  7:78140/149‑1                                                                                                                                                                                                                                                                          GCGGAGCCAGCACTATTGAAAGCTATTGCCTTAGCTTAGCTGTTTGCCGGCAGTGGGTGAAAGCACTGTGCTTGTATCGGGATATTAAGTTCGACCAGATGTCGCCAGGTGCCTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2431944‑2432060 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaccTGACTTGGCCTTCGACGGCATCCGCCAGGCCAACCGGTAGGCACCTGGCGACATCTGGTCGAACTTAATATCCCGATACAAGCACAGTGCTTTCACCCACTGCCGGCAAACAGCTAAGCTAAGGCAATAGCTTTCAATAGTGCTGGC  <  NC_002947/2432095‑2431949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.