New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2529310	NA (NA)	10 (0.210)	8/256	NT	53.2%	coding (31/1302 nt)	PP_2218	transposase
	?	NC_002947	= 2869389	9 (0.180)					intergenic (+928/‑3)	PP_2520/PP_2522	hypothetical protein/transposase

TAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGcgc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2529164‑2529310 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTTCAGCGAATTCTACCGAAGACCTTGAAAGGGATGACCCTGAAGGCGAAATTCCCCGCCTCATCATACAGCCCGCTG  <  NC_002947/2869389‑2869241                                                                                                                                                                                                                                                                                                          TAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTTATGGCCAAACTTGCCTTGGAGCAGGCCATTGCG                                                                                                                                                     <  1:40674/149‑1  AAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGC                                                                                                                                                    >  2:181809/1‑149   AGGGCCATCCCTTTCAAGGGCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGC                                                                                                                                                    <  2:103948/148‑1                                                                                                             CCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTTCAGC                                                                         >  3:160738/1‑117                                                                                                             CCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTTCAGC                                                                         <  4:160738/117‑1                                                                                                              CAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGAT                                                                               <  5:194377/110‑1                                                                                                              CAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGAT                                                                               >  6:194377/1‑110                                                                                                               AGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTT                                                                             <  7:292234/111‑1                                                                                                               AGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTT                                                                             >  8:292234/1‑111                                                                                                                GCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTTCAGCGAATTCTACCGAAGACCTTGAAAGGGATGGCCCT                                       >  4:254490/1‑148                                                                                                                GCGTAATGGCCAAACTTGCCATGGAGCAGGCCATTGCGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTTCAGCGAATTCTACCGAAGACCTTGAAAGGGATGACCCT                                       >  4:240708/1‑148                                                                                                                   TAATGGCCAAACTTGCCTTGGAGCAGGCCATTACGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTTCAGCGAATTCTACCGAAGACCTTGAAAGGGATGGCCgtaagg                                   >  7:163138/1‑143                                                                                                                                       GAGCAGGCCATTGCGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTTCAGCGAATTCTACCGAAGACCTTGAAAGGGATGACCCTGAAGGCGAAATTCCCCGCCTCAT                <  3:240708/148‑1                                                                                                                                                     GCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTTCAGCGAATTCTACCGAAGACCTTGAAAGGGATGACCCTGAAGGCGAAATTCCCCGCCTCATCATACAGCCCGCTG  <  3:191424/148‑1                                                                                                                                                                                                                                                                                                          TAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGcgc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2529164‑2529310 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGGCGGGTGCTTTTTTCTCGAATCGCGCTAGTACATCAGCCCACATCGCTCGGGTCTTCCTGACTGGATTTCAGCGAATTCTACCGAAGACCTTGAAAGGGATGACCCTGAAGGCGAAATTCCCCGCCTCATCATACAGCCCGCTG  <  NC_002947/2869389‑2869241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.