New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2600997 =	53 (1.080)	4 (0.090)	4/246	NT	8.5%	coding (474/1575 nt)	PP_2279	head‑to‑tail joining protein
	?	NC_002947	2601059 =	36 (0.780)					coding (536/1575 nt)	PP_2279	head‑to‑tail joining protein

TTGTTATGGTCTCGGGGGGTGTCGCCGGAGTCATCGCCAGGCTCGACTAATGACCGGGCCTCCTCTGGCAGTACCGCCAGGGAGACCTCCTCCTTGACCACGATGTCCAGGACGTTGCCCATTGGGTCACGCCGGACCACGTAGCGGTCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2601149‑2600997 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaaggAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTG  >  NC_002947/2601059‑2601201                                                                                                                                                                                                                                                                                                          TTGTTATGGTCTCGGGGGTTGTCGCCGGAGTAATCGCAAGGCACGAGTAATGCCCGGGCCTCCTCTGGCAGTACCGCCAGGGAGACCTCCTCCTTAACCACGATGTCCAGCACGTTGCCCATTGGGACACGCCGGACCACGTAGCGGa                                                                                                                                                      >  2:2426/1‑147    TTATGGTCTCGGGGGGTGTCGCCGGAGTCATCGCCAGGCTCGACTAATGACCGGGCCTCCTCTGGCAGTACCGCCAGGGAGACCTCCTCCTTGACCACGATGTCCAGGACGTTGCCCATTGGGTCACGCCGGACCACGTAGCGGTCAA                                                                                                                                                   <  2:212513/148‑1                                        GGCTCGACTAATGACCGGGCCTCCTCTGGCAGTACCGCCAGGGAGACCTCCTCCTTGACCACGATGTCCAGGACGTTGCCCATTGGGTCACGCCGGACCACGTAGCGG                                                                                                                                                       <  5:96906/108‑1                                        GGCTCGACTAATGACCGGGCCTCCTCTGGCAGTACCGCCAGGGAGACCTCCTCCTTGACCACGATGTCCAGGACGTTGCCCATTGGGTCACGCCGGACCACGTAGCGG                                                                                                                                                       >  6:96906/1‑108                                                                                        TCCTCCTTGACCACGATGTCCAGGACGTTGCCCATTGGGTCACGCCGGACCACGTAGCGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGA                                                                                       >  7:144538/1‑124                                                                                        TCCTCCTTGACCACGATGTCCAGGACGTTGCCCATTGGGTCACGCCGGACCACGTAGCGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGA                                                                                       <  8:144538/124‑1                                                                                                 ACCACGATGTCCAGGACGTTGCCCATTGGGTCACGCCGGACCACGTAGCGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAG                                                     <  2:19469/149‑1                                                                                                 ACCACGATGTCCAGGACGTTGCCCATTGGGTCACGCCGGACCACGTAGCGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAAC                                                        >  1:19469/1‑146                                                                                                                                                    TCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTG  <  1:15611/149‑1                                                                                                                                                                                                                                                                                                          TTGTTATGGTCTCGGGGGGTGTCGCCGGAGTCATCGCCAGGCTCGACTAATGACCGGGCCTCCTCTGGCAGTACCGCCAGGGAGACCTCCTCCTTGACCACGATGTCCAGGACGTTGCCCATTGGGTCACGCCGGACCACGTAGCGGTCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2601149‑2600997 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaaggAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTG  >  NC_002947/2601059‑2601201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.