New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2775521 =	35 (0.720)	4 (0.090)	4/244	NT	10.1%	intergenic (‑10/‑133)	PP_5521/sotB	hypothetical protein/sugar efflux transporter
	?	NC_002947	2775581 =	39 (0.860)					intergenic (‑70/‑73)	PP_5521/sotB	hypothetical protein/sugar efflux transporter

TGGAAACCGCTTCTCCGCAGACAAGGCAACAGGTCGCACGCCAGCCACCCGCTTGCAGGGGGCCAACGTACGTTTTTGTTATGGATAGGAATGCCCGGCATGGTACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAAGGAGTACCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2775677‑2775521 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaccatgcCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAGCGGTTTCCACCCATGAACGGACCCATACCCACACACCTGCCGCCCACAACGGGCAGCGG  >  NC_002947/2775581‑2775727                                                                                                                                                                                                                                                                                                                  TGGAAACCGCTTCTCCGCAGACAAGGCAACAGGTCGCACGCCAGCCACCCGCTTGCAGGGGGCCAACGTACGTTTTTGTTATGGATAGGAATGCCCGGCATGGTACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAAGGAG                                                                                                                                                             <  7:134476/149‑1   GAAACCGCTTCTCCGCAGACAAGGCAACAGGTCGCACGCCAGCCACCCGCTTGCAGCGGGCCAACGTACGTTTTTGTTATGGATAGGAATGCCCGGCATGGTACGCGCCAAGCTGGGGCCTCACAAACGCAGGGCAGCCAGAAGGAGTA                                                                                                                                                           >  3:177909/1‑149      ACCGCTTCTCCGCAGACAAGGCAACAGGTCGCACGCCAGCCACCCGCTTGCAGGGGGCCAACGTACGTTTTTGTTATGGATAGGAATGCCCGGCATGGTACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAAGGAGTACCA                                                                                                                                                        >  1:204516/1‑149         GCTTCTCCGCAGACAAGGCAACAGGTTGCACGCCAGCCACCCGCTTGCAGGGGGCCAACGTACGTTTTTGTTATGGATAGGAATGCCCGGCATGGTACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAAGGAGTACCATGC                                                                                                                                                     <  1:16128/149‑1         GCTTCTCCGCAGACAAGGCAACAGGTCGCACGCCAGCCACCCGCTTGCAGGGGGCCAACGTACGTTTTTGTTATGGATAGGAATGCCCGGCATGGTACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAAGGAGTACCATGC                                                                                                                                                     <  6:28755/149‑1                                                                               TTATGGATAGGAATGCCCGGCATGGTACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAACGAGTACCATGCCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGGGCGACCTGTT                                                                               <  5:243456/149‑1                                                                               TTATGGATAGGAATGCCCGGCATGGTACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAACGAGTACCATGCCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGAGCGACCTGTT                                                                               >  6:243456/1‑149                                                                                                 GGCATGGTACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAAGGAGTACCATGCCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAG                                                             >  3:127025/1‑149                                                                                                        TACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAAGGAGTACCATGCCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAGCGGTTTC                                                      <  4:127025/149‑1                                                                                                                                                         CATGCCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAGCGGTTTCCACCCATGAACGGACCCATACCCACACACCTGCCGCCCACAACGGGCAG     >  1:121435/1‑149                                                                                                                                                         CATGCCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAGCGGTTTCCACCCATGAACGGACCCATACCCACACACCTGCCGCCCACAACGGGCAG     >  6:105429/1‑149                                                                                                                                                         CATGCCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAGCGGTTTCCACCCATGAACGGACCCATACCCACACACCTGCCGCCCACAACGGGCAG     >  8:33341/1‑149                                                                                                                                                             CCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAGCGGTTTCCACCCATGAACGGACCCATACCCACACACCTGCCGCCCACAACGGGCAGCGG  >  2:263085/1‑148                                                                                                                                                             CCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAGCGGTTTCCACCCATGAACGGACCCATACCCACACACCTACCG                   >  1:93967/1‑131                                                                                                                                                             CCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAGCGGTTTCCACCCATGAACGGACCCATACCCACACACCTACCG                   <  2:93967/131‑1                                                                                                                                                                                                                                                                                                                  TGGAAACCGCTTCTCCGCAGACAAGGCAACAGGTCGCACGCCAGCCACCCGCTTGCAGGGGGCCAACGTACGTTTTTGTTATGGATAGGAATGCCCGGCATGGTACGCGCCAAGCTGGGGCCTCACAACCGCAGGGCAGCCAGAAGGAGTACCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2775677‑2775521 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaccatgcCGGGCATTCCTATCCATAACAAAAACGTACGTTGGCCCCCTGCAAGCGGGTGGCTGGCGTGCGACCTGTTGCCTTGTCTGCGGAGAAGCGGTTTCCACCCATGAACGGACCCATACCCACACACCTGCCGCCCACAACGGGCAGCGG  >  NC_002947/2775581‑2775727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.