| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2839904 | 61 (1.250) | 3 (0.070) | 3/246 | NT | 5.5% | coding (678/678 nt) | PP_2491 | ThiJ/PfpI family protein |
| ? | NC_002947 | = 2839944 | 45 (0.980) | coding (638/678 nt) | PP_2491 | ThiJ/PfpI family protein | |||||
GACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2839750‑2839904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcctCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCCGATGTCCGCCTACGTGGTTTTCACCCGCGAGCACACCACCGACGCTGCTGAACTGCAACGTTACGCGCAGGAGGCGCCTGCCGCACGAGAAGGGCA < NC_002947/2839944‑2839800 GACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGG < 3:191355/149‑1GACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGG > 4:99725/1‑149GACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGG < 3:23811/148‑1 CTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCT > 8:212201/1‑149 CAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCT > 2:275980/1‑148 AACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCT > 5:187183/1‑147 GTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCTCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCT > 3:265358/1‑148 CTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCTCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCC < 1:57385/149‑1 CTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCTCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCC < 4:265358/147‑1 CTCCTCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCCGATGTCCGCCTACGTGGTTTTCACCCGCGAGCACACCACCGACGCTGCTGAACTGCAACGTTACGCGCAGGAGGCGCCTGCCGCACGAGAAGGG > 3:276977/1‑148 TCCTCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCCGATGTCCGCCTACGTGGTTTTCACCCGCGAGCACACCACCGACGCTGCTGAACTGCAACGTTACGCGCAGGAGGCGCCTGCCGCACGAGAAGGGCA > 2:113408/1‑149 CTCCGAAGCCACCGCCCACGCGCTGCTCATCGTGCTGAGCTAAGGAGGCCCGATGTCCGCCTAGGTGGTTTTCACCCGCGAGCACACCACCGACGCTGCTGAACTGCAACGTTACGCGCAGGAGGCGCCTGCCGCACGAGAATGGCA < 7:201730/147‑1 GACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2839750‑2839904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcctCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCCGATGTCCGCCTACGTGGTTTTCACCCGCGAGCACACCACCGACGCTGCTGAACTGCAACGTTACGCGCAGGAGGCGCCTGCCGCACGAGAAGGGCA < NC_002947/2839944‑2839800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |