New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2987692 =	NA (NA)	5 (0.110)	5/254	NT	NA	coding (707/2991 nt)	PP_2612	membrane protein
	?	NC_002947	2987745 =	NA (NA)					coding (654/2991 nt)	PP_2612	membrane protein

CAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTGACCTGGAGCAGCGACCCGGTCACCGAAACCTTGCCCATCGGCAACCTCCATGCCATCGCCCGGCACTACCCCTGGACCCAGCCGAAAGTGCCAGTGGTGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2987843‑2987692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACACATGGGGCTGGGTGGACGGCGCCTGGTTG  >  NC_002947/2987745‑2987892                                                                                                                                                                                                                                                                                                              CAAACCTGGGTCGAAGACGTCAAGCCAAGCGAGCGGCGCATGCCGCTGACCTGGAGCAGCGACCCGGTCACCGAAACCTTGCCCATCGGGAACCTCGATGCCATCGCCCGGCACTACCCCTGGACCCAGCCGAAAGTGCCAGTGGTGGT                                                                                                                                                         <  5:101825/149‑1                                                                      ACCGAAACCTTGCCCATCGGCAACCTCCATGCCATCGCCCGGCACTACCCCTGGACCCAGCCGAAAGTGCCAGTGGTGGTGG                                                                                                                                                       >  4:200327/1‑82                                                                                              CTCCATGCCATCGCCCGGCACTACCCCTGGACCCAGCCGAAAGTGCCAGTGGTGGTGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGAC                                                            >  3:212543/1‑149                                                                                                 CATGCCATCGCCCGGCACTACCCCTGGACCCAGCCGAAAGTGCCAGTGGTGGTGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACC                                                           >  5:302071/1‑147                                                                                                  ATGCCATCGCCCGGCACTACCCCTGGACCCAGCCGAAAGTGCCAGTGGTGGTGGCATGGAGGTTGACGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTTGGTTGGCTGGACTTCTTCGACCCAG                                                        >  8:237543/1‑149                                                                                                       ATCGCCCGGCACTACCCCTGGACCCAGCCGAAAGTGCCAGTGGTGGTGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACCCAG                                                        >  5:35783/1‑144                                                                                                       ATCGCCCGGCACTACCCCTGGACCCAGCCGAAAGTGCCAGTGGTGGTGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACCCAG                                                        <  6:35783/144‑1                                                                                                                                                     TGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACACATGGGGCTGGGTGGACGGCGCCTGG     <  4:10475/149‑1                                                                                                                                                       GCATGGAGGTTGCCGATGGTCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGGCGCTCGGTTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACACATGGGGCTGGGTGGACGGCGCCTGGT    <  6:101825/148‑1                                                                                                                                                        CATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACACATGGGGCTGGGTGGACGGCGCCTGGTTG  <  6:302071/149‑1                                                                                                                                                                                                                                                                                                              CAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTGACCTGGAGCAGCGACCCGGTCACCGAAACCTTGCCCATCGGCAACCTCCATGCCATCGCCCGGCACTACCCCTGGACCCAGCCGAAAGTGCCAGTGGTGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2987843‑2987692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACACATGGGGCTGGGTGGACGGCGCCTGGTTG  >  NC_002947/2987745‑2987892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.